RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 ISL1P61371 349 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 CSNK2BP67870 215 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 PLGLB1Q02325 96 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 EGR4Q05215 589 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 TMEM44Q2T9K0 475 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 SYT14P1Q58G82 188 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 RBM48Q5RL73 367 aaKnown RBP12.98□□□□□ -0.33
SHMT2-208ENST00000553868 UGT2A3Q6UWM9 527 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 PTCHD4Q6ZW05 846 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 SLC46A3Q7Z3Q1 461 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 NANOGNBQ7Z5D8 188 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 SULF2Q8IWU5 870 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 ZNF786Q8N393 782 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 OR51A7Q8NH64 312 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 OR14L1PQ8NHC6 308 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 MFSD8Q8NHS3 518 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 POC1BQ8TC44 478 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 TAAR8Q969N4 342 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 SCMH1Q96GD3 660 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 PLEKHA8Q96JA3 519 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 SAMD8Q96LT4 415 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 OR2B2Q9GZK3 357 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 KLHL1Q9NR64 748 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 QPCTLQ9NXS2 382 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 UBAP1Q9NZ09 502 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 BLOC1S6Q9UL45 172 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 MYRFQ9Y2G1 1151 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 HDGFL3Q9Y3E1 203 aa12.98□□□□□ -0.33
SHMT2-208ENST00000553868 TRAV27A0A087WT01 109 aa12.97□□□□□ -0.33
SHMT2-208ENST00000553868 M0R3G1 203 aa12.97□□□□□ -0.33
SHMT2-208ENST00000553868 ZNHIT1O43257 154 aa12.97□□□□□ -0.33
SHMT2-208ENST00000553868 ZIC3O60481 467 aa12.97□□□□□ -0.33
SHMT2-208ENST00000553868 OR6A2O95222 327 aa12.97□□□□□ -0.33
SHMT2-208ENST00000553868 BGLAPP02818 100 aa12.97□□□□□ -0.33
SHMT2-208ENST00000553868 ASAH2BP0C7U1 165 aa12.97□□□□□ -0.33
SHMT2-208ENST00000553868 CASP6P55212 293 aa12.97□□□□□ -0.33
SHMT2-208ENST00000553868 CD47Q08722 323 aa12.97□□□□□ -0.33
SHMT2-208ENST00000553868 FOXO1Q12778 655 aa12.97□□□□□ -0.33
SHMT2-208ENST00000553868 MAD2L1BPQ15013 274 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-208ENST00000553868 PGGHGQ32M88 737 aa12.97□□□□□ -0.33
SHMT2-208ENST00000553868 TMEM236Q5W0B7 351 aa12.97□□□□□ -0.33
SHMT2-208ENST00000553868 Q6ZPB1 254 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-208ENST00000553868 GALNTL5Q7Z4T8 443 aa12.97□□□□□ -0.33
SHMT2-208ENST00000553868 SLC22A16Q86VW1 577 aa12.97□□□□□ -0.33
SHMT2-208ENST00000553868 OR8D4Q8NGM9 314 aa12.97□□□□□ -0.33
SHMT2-208ENST00000553868 OR8J1Q8NGP2 316 aa12.97□□□□□ -0.33
SHMT2-208ENST00000553868 FBLIM1Q8WUP2 373 aa12.97□□□□□ -0.33
SHMT2-208ENST00000553868 HDAC2Q92769 488 aaKnown RBP12.97□□□□□ -0.33
SHMT2-208ENST00000553868 Q96MT0 163 aa12.97□□□□□ -0.33
SHMT2-208ENST00000553868 TNFRSF13CQ96RJ3 184 aa12.97□□□□□ -0.33
SHMT2-208ENST00000553868 IFT27Q9BW83 186 aa12.97□□□□□ -0.33
SHMT2-208ENST00000553868 POLDIP3Q9BY77 421 aaKnown RBP12.97□□□□□ -0.33
SHMT2-208ENST00000553868 PLA2G12AQ9BZM1 189 aa12.97□□□□□ -0.33
SHMT2-208ENST00000553868 UBQLN3Q9H347 655 aa12.97□□□□□ -0.33
SHMT2-208ENST00000553868 HIF3AQ9Y2N7 669 aa12.97□□□□□ -0.33
SHMT2-208ENST00000553868 SLC6A5Q9Y345 797 aa12.97□□□□□ -0.33
SHMT2-208ENST00000553868 HEATR5AQ86XA9 2040 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 ZC3H12DA2A288 527 aaKnown RBP12.96□□□□□ -0.33
SHMT2-208ENST00000553868 OR2M5A3KFT3 312 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 TRAPPC6AO75865 159 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 IGFBP1P08833 259 aaPredicted RBP12.96□□□□□ -0.33
SHMT2-208ENST00000553868 TCEA1P23193 301 aaKnown RBP12.96□□□□□ -0.33
SHMT2-208ENST00000553868 RPL4P36578 427 aaKnown RBP12.96□□□□□ -0.33
SHMT2-208ENST00000553868 PCYT1AP49585 367 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 MEOX1P50221 254 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 CXCR4P61073 352 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 SNRPGP62308 76 aaKnown RBP12.96□□□□□ -0.33
SHMT2-208ENST00000553868 RPS4XP62701 263 aaKnown RBP12.96□□□□□ -0.33
SHMT2-208ENST00000553868 RAC1P63000 192 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 PMP22Q01453 160 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 CDK5R2Q13319 367 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 SNAPC1Q16533 368 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 HYAL4Q2M3T9 481 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 KCTD21Q4G0X4 260 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 CLEC12AQ5QGZ9 265 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 C6orf141Q5SZD1 244 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 ARHGAP11AQ6P4F7 1023 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 CLEC9AQ6UXN8 241 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 DPY19L2P2Q6ZN68 376 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 ENTHD1Q8IYW4 607 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 LNX2Q8N448 690 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 SCAIQ8N9R8 606 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 ZFP62Q8NB50 900 aaPredicted RBP12.96□□□□□ -0.33
SHMT2-208ENST00000553868 ATP6V1C2Q8NEY4 427 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 OR5J2Q8NH18 312 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 RHOXF1Q8NHV9 184 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 SLC25A36Q96CQ1 311 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 MOGAT1Q96PD6 335 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 PTDSS2Q9BVG9 487 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 OR11A1Q9GZK7 315 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 ZNF703Q9H7S9 590 aaPredicted RBP12.96□□□□□ -0.33
SHMT2-208ENST00000553868 CLN6Q9NWW5 311 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 ALKBH4Q9NXW9 302 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 SCN3BQ9NY72 215 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 MRPL39Q9NYK5 338 aaKnown RBP12.96□□□□□ -0.33
SHMT2-208ENST00000553868 TVP23BQ9NYZ1 205 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 RNF6Q9Y252 685 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 MEMO1Q9Y316 297 aa12.96□□□□□ -0.33
SHMT2-208ENST00000553868 HCFC1P51610 2035 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 PINLYPA6NC86 204 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms