RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 ZNF559Q9BR84 538 aa3.38□□□□□ -1.87
ATXN3-217ENST00000553287 WWP1Q9H0M0 922 aa3.38□□□□□ -1.87
ATXN3-217ENST00000553287 CARD9Q9H257 536 aa3.38□□□□□ -1.87
ATXN3-217ENST00000553287 UCK1Q9HA47 277 aa3.38□□□□□ -1.87
ATXN3-217ENST00000553287 VPS18Q9P253 973 aa3.38□□□□□ -1.87
ATXN3-217ENST00000553287 CTSFQ9UBX1 484 aa3.38□□□□□ -1.87
ATXN3-217ENST00000553287 Q9UF83 564 aa3.38□□□□□ -1.87
ATXN3-217ENST00000553287 GIMAP2Q9UG22 337 aa3.38□□□□□ -1.87
ATXN3-217ENST00000553287 MEMO1Q9Y316 297 aa3.38□□□□□ -1.87
ATXN3-217ENST00000553287 AKAP6Q13023 2319 aa3.38□□□□□ -1.87
ATXN3-217ENST00000553287 CPAMD8Q8IZJ3 1885 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 RNF212BA8MTL3 300 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 ZNF487B1APH4 448 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 E7EQ34 232 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 NPIPA5E9PKD4 350 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 H3BMH7 237 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 PSMD11O00231 422 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 KMOO15229 486 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 ST8SIA3O43173 380 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 UGT1A9O60656 530 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 RHBDL1O75783 438 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 POP7O75817 140 aaKnown RBP3.37□□□□□ -1.87
ATXN3-217ENST00000553287 OR2B3O76000 313 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 CDK14O94921 469 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 UQCRHP07919 91 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 GIG44P09565 113 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-217ENST00000553287 ZNF30P17039 623 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 UGT1A6P19224 532 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 IDSP22304 550 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 TEAD1P28347 426 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 PRDX3P30048 256 aaKnown RBP3.37□□□□□ -1.87
ATXN3-217ENST00000553287 RFC3P40938 356 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 OR1D4P47884 311 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 SMSP52788 366 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 TFF3Q07654 80 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 XRCC4Q13426 336 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 EXOC3L4Q17RC7 722 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 NKAIN1Q4KMZ8 207 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 ISLR2Q6UXK2 745 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 GBP6Q6ZN66 633 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 COX15Q7KZN9 410 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 STRADAQ7RTN6 431 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 OOSP2Q86WS3 158 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 DOLPP1Q86YN1 238 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 ACBD4Q8NC06 268 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 CHDHQ8NE62 594 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-217ENST00000553287 OR11G2Q8NGC1 345 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 GDAP1Q8TB36 358 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 PSMF1Q92530 271 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 NTAN1Q96AB6 310 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 NTNG2Q96CW9 530 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 RBM18Q96H35 190 aaKnown RBP3.37□□□□□ -1.87
ATXN3-217ENST00000553287 C12orf66Q96MD2 445 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 SIGLEC12Q96PQ1 595 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 SNRNP25Q9BV90 132 aaKnown RBP3.37□□□□□ -1.87
ATXN3-217ENST00000553287 RAB33BQ9H082 229 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 UGT1A7Q9HAW7 530 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 UGT1A10Q9HAW8 530 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 UGT1A8Q9HAW9 530 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 FANCEQ9HB96 536 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 SLCO1C1Q9NYB5 712 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 CIDEBQ9UHD4 219 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 RSPH14Q9UHP6 348 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 IKZF3Q9UKT9 509 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 NPIPA1Q9UND3 350 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 PPIL1Q9Y3C6 166 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 CSPG4Q6UVK1 2322 aa3.37□□□□□ -1.87
ATXN3-217ENST00000553287 TGP01266 2768 aa3.36□□□□□ -1.87
ATXN3-217ENST00000553287 GTPBP10A4D1E9 387 aaKnown RBP3.36□□□□□ -1.87
ATXN3-217ENST00000553287 A8MUI8 341 aa3.36□□□□□ -1.87
ATXN3-217ENST00000553287 PSMA7O14818 248 aa3.36□□□□□ -1.87
ATXN3-217ENST00000553287 CHUKO15111 745 aa3.36□□□□□ -1.87
ATXN3-217ENST00000553287 SNRNP200O75643 2136 aaKnown RBP3.36□□□□□ -1.87
ATXN3-217ENST00000553287 RAD51DO75771 328 aa3.36□□□□□ -1.87
ATXN3-217ENST00000553287 TOXO94900 526 aa3.36□□□□□ -1.87
ATXN3-217ENST00000553287 IGHG3P01860 377 aa3.36□□□□□ -1.87
ATXN3-217ENST00000553287 HLA-DQB2P05538 268 aa3.36□□□□□ -1.87
ATXN3-217ENST00000553287 HLA-DPA1P20036 260 aa3.36□□□□□ -1.87
ATXN3-217ENST00000553287 CD86P42081 329 aa3.36□□□□□ -1.87
ATXN3-217ENST00000553287 KCNJ1P48048 391 aa3.36□□□□□ -1.87
ATXN3-217ENST00000553287 EFNA3P52797 238 aa3.36□□□□□ -1.87
ATXN3-217ENST00000553287 DCDP81605 110 aaKnown RBP3.36□□□□□ -1.87
ATXN3-217ENST00000553287 RFTN1Q14699 578 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-217ENST00000553287 SLC17A1Q14916 467 aa3.36□□□□□ -1.87
ATXN3-217ENST00000553287 C17orf58Q2M2W7 97 aa3.36□□□□□ -1.87
ATXN3-217ENST00000553287 ANKRD20A8PQ5CZ79 823 aa3.36□□□□□ -1.87
ATXN3-217ENST00000553287 TFDP3Q5H9I0 405 aa3.36□□□□□ -1.87
ATXN3-217ENST00000553287 CAPN13Q6MZZ7 669 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-217ENST00000553287 SHQ1Q6PI26 577 aaKnown RBP3.36□□□□□ -1.87
ATXN3-217ENST00000553287 TMEM220Q6QAJ8 160 aa3.36□□□□□ -1.87
ATXN3-217ENST00000553287 SIGLEC15Q6ZMC9 328 aa3.36□□□□□ -1.87
ATXN3-217ENST00000553287 CYP4V2Q6ZWL3 525 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-217ENST00000553287 BIVMQ86UB2 503 aa3.36□□□□□ -1.87
ATXN3-217ENST00000553287 PRR22Q8IZ63 422 aa3.36□□□□□ -1.87
ATXN3-217ENST00000553287 C2orf73Q8N5S3 287 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-217ENST00000553287 N4BP2L2Q92802 583 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-217ENST00000553287 GLYATL1Q969I3 302 aa3.36□□□□□ -1.87
ATXN3-217ENST00000553287 ERP27Q96DN0 273 aa3.36□□□□□ -1.87
ATXN3-217ENST00000553287 ZBED6CLQ96FA7 236 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-217ENST00000553287 DHTKD1Q96HY7 919 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms