RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 SERPINE2P07093 398 aa4.54□□□□□ -1.68
SCFD1-208ENST00000553278 SLC1A2P43004 574 aa4.54□□□□□ -1.68
SCFD1-208ENST00000553278 MAGEA9P43362 315 aa4.54□□□□□ -1.68
SCFD1-208ENST00000553278 TFPI2P48307 235 aa4.54□□□□□ -1.68
SCFD1-208ENST00000553278 ARRB1P49407 418 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-208ENST00000553278 GPX6P59796 221 aa4.54□□□□□ -1.68
SCFD1-208ENST00000553278 Q3ZCU0 254 aa4.54□□□□□ -1.68
SCFD1-208ENST00000553278 STUMQ69YW2 141 aa4.54□□□□□ -1.68
SCFD1-208ENST00000553278 APOBEC3FQ8IUX4 373 aaKnown RBP4.54□□□□□ -1.68
SCFD1-208ENST00000553278 CADM2Q8N3J6 435 aa4.54□□□□□ -1.68
SCFD1-208ENST00000553278 JAGN1Q8N5M9 183 aa4.54□□□□□ -1.68
SCFD1-208ENST00000553278 C8orf31Q8N9H6 132 aa4.54□□□□□ -1.68
SCFD1-208ENST00000553278 OR1S2Q8NGQ3 325 aa4.54□□□□□ -1.68
SCFD1-208ENST00000553278 MSANTD3Q96H12 275 aa4.54□□□□□ -1.68
SCFD1-208ENST00000553278 PGLYRP4Q96LB8 373 aa4.54□□□□□ -1.68
SCFD1-208ENST00000553278 OPALINQ96PE5 141 aa4.54□□□□□ -1.68
SCFD1-208ENST00000553278 ACTR6Q9GZN1 396 aa4.54□□□□□ -1.68
SCFD1-208ENST00000553278 FGF20Q9NP95 211 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-208ENST00000553278 B4GALT7Q9UBV7 327 aa4.54□□□□□ -1.68
SCFD1-208ENST00000553278 LSM7Q9UK45 103 aaKnown RBP4.54□□□□□ -1.68
SCFD1-208ENST00000553278 IFITM10A6NMD0 228 aa4.53□□□□□ -1.68
SCFD1-208ENST00000553278 AIREO43918 545 aa4.53□□□□□ -1.68
SCFD1-208ENST00000553278 TBPP20226 339 aa4.53□□□□□ -1.68
SCFD1-208ENST00000553278 PAX8Q06710 450 aa4.53□□□□□ -1.68
SCFD1-208ENST00000553278 ZFP36L1Q07352 338 aaKnown RBP4.53□□□□□ -1.68
SCFD1-208ENST00000553278 CD47Q08722 323 aa4.53□□□□□ -1.68
SCFD1-208ENST00000553278 FAM83EQ2M2I3 478 aa4.53□□□□□ -1.68
SCFD1-208ENST00000553278 SOHLH1Q5JUK2 328 aa4.53□□□□□ -1.68
SCFD1-208ENST00000553278 MARCH8Q5T0T0 291 aa4.53□□□□□ -1.68
SCFD1-208ENST00000553278 RUSC1-AS1Q66K80 236 aa4.53□□□□□ -1.68
SCFD1-208ENST00000553278 H3F3CQ6NXT2 135 aa4.53□□□□□ -1.68
SCFD1-208ENST00000553278 TRIM40Q6P9F5 258 aa4.53□□□□□ -1.68
SCFD1-208ENST00000553278 ZNF613Q6PF04 617 aa4.53□□□□□ -1.68
SCFD1-208ENST00000553278 TIPARPQ7Z3E1 657 aaKnown RBP4.53□□□□□ -1.68
SCFD1-208ENST00000553278 SKA3Q8IX90 412 aa4.53□□□□□ -1.68
SCFD1-208ENST00000553278 FAM58AQ8N1B3 248 aa4.53□□□□□ -1.68
SCFD1-208ENST00000553278 EID2Q8N6I1 236 aa4.53□□□□□ -1.68
SCFD1-208ENST00000553278 FBXL13Q8NEE6 735 aa4.53□□□□□ -1.68
SCFD1-208ENST00000553278 OR2G2Q8NGZ5 317 aa4.53□□□□□ -1.68
SCFD1-208ENST00000553278 OR1E3Q8WZA6 343 aa4.53□□□□□ -1.68
SCFD1-208ENST00000553278 ASB9Q96DX5 294 aa4.53□□□□□ -1.68
SCFD1-208ENST00000553278 CMTM7Q96FZ5 175 aa4.53□□□□□ -1.68
SCFD1-208ENST00000553278 LINC00479Q96M42 142 aa4.53□□□□□ -1.68
SCFD1-208ENST00000553278 NOL4LQ96MY1 436 aaPredicted RBP4.53□□□□□ -1.68
SCFD1-208ENST00000553278 GBA3Q9H227 469 aa4.53□□□□□ -1.68
SCFD1-208ENST00000553278 ISG20L2Q9H9L3 353 aaKnown RBP4.53□□□□□ -1.68
SCFD1-208ENST00000553278 MYOZ2Q9NPC6 264 aa4.53□□□□□ -1.68
SCFD1-208ENST00000553278 MIEF1Q9NQG6 463 aa4.53□□□□□ -1.68
SCFD1-208ENST00000553278 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.53□□□□□ -1.68
SCFD1-208ENST00000553278 ZNHIT6Q9NWK9 470 aaKnown RBP4.53□□□□□ -1.68
SCFD1-208ENST00000553278 DHRS4-AS1Q9P1J3 65 aa4.53□□□□□ -1.68
SCFD1-208ENST00000553278 STOX2Q9P2F5 926 aaPredicted RBP4.53□□□□□ -1.68
SCFD1-208ENST00000553278 MYEF2Q9P2K5 600 aaKnown RBP4.53□□□□□ -1.68
SCFD1-208ENST00000553278 PROCRQ9UNN8 238 aa4.53□□□□□ -1.68
SCFD1-208ENST00000553278 FANCIQ9NVI1 1328 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 IGHV1OR21-1A0A087WYE8 117 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 TMEM120BA0PK00 339 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 PRR23AA6NEV1 266 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 C12orf71A8MTZ7 269 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 PSMD11O00231 422 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 POLR1CO15160 346 aaPredicted RBP4.52□□□□□ -1.69
SCFD1-208ENST00000553278 YKT6O15498 198 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 ZNF254O75437 659 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 IGHV2-5P01817 119 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 FGGP02679 453 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 PGAM2P15259 253 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 FASP25445 335 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 NTSP30990 170 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 CCNG1P51959 295 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 PAX2Q02962 417 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 TGIF1Q15583 401 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 QRICH1Q2TAL8 776 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 ZNF829Q3KNS6 432 aaPredicted RBP4.52□□□□□ -1.69
SCFD1-208ENST00000553278 SLC22A6Q4U2R8 563 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 KLF17Q5JT82 389 aaPredicted RBP4.52□□□□□ -1.69
SCFD1-208ENST00000553278 WDR74Q6RFH5 385 aaPredicted RBP4.52□□□□□ -1.69
SCFD1-208ENST00000553278 Q6ZN92 141 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 USP43Q70EL4 1123 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 HDDC2Q7Z4H3 204 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 SLC26A11Q86WA9 606 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 HIPK1Q86Z02 1210 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 IQCF2Q8IXL9 164 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 TMEM104Q8NE00 496 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 LILRB4Q8NHJ6 448 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 LKAAEAR1Q8TD35 194 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 TOP1MTQ969P6 601 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 ATP6V1G3Q96LB4 118 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 KCTD14Q9BQ13 255 aaPredicted RBP4.52□□□□□ -1.69
SCFD1-208ENST00000553278 SELENOIQ9C0D9 397 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 GAL3ST2Q9H3Q3 398 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 MRPL47Q9HD33 250 aaKnown RBP4.52□□□□□ -1.69
SCFD1-208ENST00000553278 ADAP2Q9NPF8 381 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 SCRT2Q9NQ03 307 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 KCNIP1Q9NZI2 227 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 ZMAT5Q9UDW3 170 aaKnown RBP4.52□□□□□ -1.69
SCFD1-208ENST00000553278 SAR1BQ9Y6B6 198 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 GON4LQ3T8J9 2241 aa4.52□□□□□ -1.69
SCFD1-208ENST00000553278 A0A1W2PRD5 423 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 SHISA9B4DS77 424 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 PRSS44E7EML9 344 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms