RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 UMODP07911 640 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 MGMTP16455 207 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 CTRB1P17538 263 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 CXCR2P25025 360 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 ALDH3A1P30838 453 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 RBM34P42696 430 aaKnown RBP3.63□□□□□ -1.83
USP44-208ENST00000552440 DNASE1L1P49184 302 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 GLUD2P49448 558 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 PRLHRP49683 370 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 NKX2-5P52952 324 aaPredicted RBP3.63□□□□□ -1.83
USP44-208ENST00000552440 CRISP1P54107 249 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 RIPK4P57078 832 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 B3GALT5-AS1P59052 145 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 VLDLRP98155 873 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 ID2Q02363 134 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 MFAP5Q13361 173 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 TPBGQ13641 420 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 ZNF268Q14587 947 aaPredicted RBP3.63□□□□□ -1.83
USP44-208ENST00000552440 UBE2V2Q15819 145 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 DUSP6Q16828 381 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 GTDC1Q4AE62 458 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 CTRB2Q6GPI1 263 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 FAHD1Q6P587 224 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 SPESP1Q6UW49 350 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 RAD9BQ6WBX8 426 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.63□□□□□ -1.83
USP44-208ENST00000552440 APTXQ7Z2E3 356 aaKnown RBP3.63□□□□□ -1.83
USP44-208ENST00000552440 NUFIP2Q7Z417 695 aaKnown RBP3.63□□□□□ -1.83
USP44-208ENST00000552440 HSD11B1LQ7Z5J1 315 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 TMEM25Q86YD3 366 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 HS3ST5Q8IZT8 346 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 PGAM4Q8N0Y7 254 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 LINC01561Q8N1V8 128 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 CLIP4Q8N3C7 705 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 MS4A15Q8N5U1 240 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 C9orf106Q8NAJ2 232 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 SEMA6DQ8NFY4 1073 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 OR4D9Q8NGE8 314 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 OR52N5Q8NH56 324 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 ACTL9Q8TC94 416 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 DLX4Q92988 240 aaPredicted RBP3.63□□□□□ -1.83
USP44-208ENST00000552440 CENPNQ96H22 339 aaPredicted RBP3.63□□□□□ -1.83
USP44-208ENST00000552440 C4orf45Q96LM5 186 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 RBBP8Q99708 897 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 MICU1Q9BPX6 476 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 NEURL2Q9BR09 285 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 POLDIP3Q9BY77 421 aaKnown RBP3.63□□□□□ -1.83
USP44-208ENST00000552440 PORCNQ9H237 461 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 NHEJ1Q9H9Q4 299 aaPredicted RBP3.63□□□□□ -1.83
USP44-208ENST00000552440 PATZ1Q9HBE1 687 aaKnown RBP3.63□□□□□ -1.83
USP44-208ENST00000552440 HRASLSQ9HDD0 168 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 TMEM45AQ9NWC5 275 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 EIF3KQ9UBQ5 218 aaKnown RBP3.63□□□□□ -1.83
USP44-208ENST00000552440 SCML2Q9UQR0 700 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 ADGRL3Q9HAR2 1447 aa3.63□□□□□ -1.83
USP44-208ENST00000552440 STRCQ7RTU9 1775 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 ERVV-1B6SEH8 477 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 TMEM238C9JI98 176 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 H3BNX3 289 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 SULT1C2O00338 296 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 EIF4E2O60573 245 aaKnown RBP3.62□□□□□ -1.83
USP44-208ENST00000552440 C1orf105O95561 183 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 FGF19O95750 216 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 BMP15O95972 392 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 HMGN1P05114 100 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 COX5BP10606 129 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 HSPD1P10809 573 aaKnown RBP3.62□□□□□ -1.83
USP44-208ENST00000552440 ZP3P21754 424 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 GNLYP22749 145 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 CERS1P27544 350 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 OPRD1P41143 372 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 MAP3K8P41279 467 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 ALDH3B2P48448 385 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 PRELPP51888 382 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 MRPS22P82650 360 aaKnown RBP3.62□□□□□ -1.83
USP44-208ENST00000552440 TFF2Q03403 129 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 C2orf80Q0P641 193 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 SCRN3Q0VDG4 424 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 TRAF2Q12933 501 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 PSG5Q15238 335 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 TMED2Q15363 201 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 UPP1Q16831 310 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 ZNF284Q2VY69 593 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 ZNF672Q499Z4 452 aaPredicted RBP3.62□□□□□ -1.83
USP44-208ENST00000552440 TMEM52BQ4KMG9 183 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 FGD3Q5JSP0 725 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 CERS6Q6ZMG9 384 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 ZNF836Q6ZNA1 936 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 SLC25A48Q6ZT89 311 aaKnown RBP3.62□□□□□ -1.83
USP44-208ENST00000552440 AHSA2Q719I0 299 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 SSX7Q7RTT5 188 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 SSX6Q7RTT6 188 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 CMTM1Q8IZ96 169 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 C2orf73Q8N5S3 287 aaPredicted RBP3.62□□□□□ -1.83
USP44-208ENST00000552440 TPRX1Q8N7U7 411 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 OR4F17Q8NGA8 305 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 OR6Q1Q8NGQ2 317 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 OR4F5Q8NH21 305 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 MAGEC3Q8TD91 643 aa3.62□□□□□ -1.83
USP44-208ENST00000552440 ACER1Q8TDN7 264 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms