RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 OR1Q1Q15612 314 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 ADRM1Q16186 407 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 INTS11Q5TA45 600 aaKnown RBP8.17□□□□□ -1.1
YBX3-218ENST00000546298 ZNF613Q6PF04 617 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 B3GLCTQ6Y288 498 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 DHDDSQ86SQ9 333 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 PATL1Q86TB9 770 aaKnown RBP8.17□□□□□ -1.1
YBX3-218ENST00000546298 UEVLDQ8IX04 471 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 C10orf53Q8N6V4 93 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 SCAIQ8N9R8 606 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 MAPK1IP1LQ8NDC0 245 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 IL17RDQ8NFM7 739 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 OR10H5Q8NGA6 315 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 OR4F15Q8NGB8 312 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 SLC26A7Q8TE54 656 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 FAM168AQ92567 244 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 SLC41A3Q96GZ6 507 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 ANKRD27Q96NW4 1050 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 MCHR1Q99705 422 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 CPPED1Q9BRF8 314 aaPredicted RBP8.17□□□□□ -1.1
YBX3-218ENST00000546298 TMEM43Q9BTV4 400 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 IKZF5Q9H5V7 419 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 GPR35Q9HC97 309 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 YAE1D1Q9NRH1 226 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 KLHL14Q9P2G3 628 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 B3GAT1Q9P2W7 334 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 FLNAP21333 2647 aaKnown RBP8.17□□□□□ -1.1
YBX3-218ENST00000546298 FREM1Q5H8C1 2179 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 IGKV1D-42A0A075B6H8 117 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 A0A096LPE4 126 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 IGHV1-18A0A0C4DH31 117 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 A0A1W2PPZ6 126 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 ZNF726A6NNF4 738 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 B9A039 149 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 PDE5AO76074 875 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 F12P00748 615 aaPredicted RBP8.16□□□□□ -1.1
YBX3-218ENST00000546298 ARR3P36575 388 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 SERPINF1P36955 418 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 NAAAQ02083 359 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 LGALS3BPQ08380 585 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 LOXL1Q08397 574 aaPredicted RBP8.16□□□□□ -1.1
YBX3-218ENST00000546298 CYLC2Q14093 348 aaPredicted RBP8.16□□□□□ -1.1
YBX3-218ENST00000546298 CEACAM16Q2WEN9 425 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 GLIPR1L2Q4G1C9 344 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 C10orf111Q8N326 155 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 SMYD1Q8NB12 490 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 RASSF5Q8WWW0 418 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 PROX1Q92786 737 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 FBXO17Q96EF6 278 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 THOC1Q96FV9 657 aaKnown RBP8.16□□□□□ -1.1
YBX3-218ENST00000546298 LRR1Q96L50 414 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 OR2M2Q96R28 347 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 SH3GL1Q99961 368 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 PRR14Q9BWN1 585 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 CRLF2Q9HC73 371 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 NPHS2Q9NP85 383 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 MYOZ1Q9NP98 299 aaPredicted RBP8.16□□□□□ -1.1
YBX3-218ENST00000546298 MRPL39Q9NYK5 338 aaKnown RBP8.16□□□□□ -1.1
YBX3-218ENST00000546298 CRNNQ9UBG3 495 aaPredicted RBP8.16□□□□□ -1.1
YBX3-218ENST00000546298 USP22Q9UPT9 525 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 NOX1Q9Y5S8 564 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 FKBP7Q9Y680 259 aa8.16□□□□□ -1.1
YBX3-218ENST00000546298 FN1P02751 2386 aaKnown RBP8.15□□□□□ -1.1
YBX3-218ENST00000546298 RAI1Q7Z5J4 1906 aaPredicted RBP8.15□□□□□ -1.1
YBX3-218ENST00000546298 IGHV4-30-2A0A087WSY4 118 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 A0A0G2JND7 137 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 A8MV72 311 aaPredicted RBP8.15□□□□□ -1.1
YBX3-218ENST00000546298 ZNF99A8MXY4 864 aaPredicted RBP8.15□□□□□ -1.1
YBX3-218ENST00000546298 M0R3G1 203 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 TRAF3IP2O43734 574 aaPredicted RBP8.15□□□□□ -1.1
YBX3-218ENST00000546298 CHP2O43745 196 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 EDF1O60869 148 aaKnown RBP8.15□□□□□ -1.1
YBX3-218ENST00000546298 ENTPD5O75356 428 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 OR6A2O95222 327 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 IFNA2P01563 188 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 IGLV1-44P01699 117 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 BGLAPP02818 100 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 ERCC1P07992 297 aaPredicted RBP8.15□□□□□ -1.1
YBX3-218ENST00000546298 CECR9P0C854 216 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 CBLP22681 906 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 AHCYP23526 432 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 CAPZA2P47755 286 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 CDH12P55289 794 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 PCBP3P57721 371 aaKnown RBP8.15□□□□□ -1.1
YBX3-218ENST00000546298 MTPNP58546 118 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 POU3F1Q03052 451 aaPredicted RBP8.15□□□□□ -1.1
YBX3-218ENST00000546298 KRTAP1-1Q07627 177 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 PUDPQ08623 228 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 SWI5Q1ZZU3 235 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 LINGO2Q7L985 606 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 SLC46A3Q7Z3Q1 461 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 PXKQ7Z7A4 578 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 COMTD1Q86VU5 262 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 LSRQ86X29 649 aaPredicted RBP8.15□□□□□ -1.1
YBX3-218ENST00000546298 PRIMA1Q86XR5 153 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 PTOV1Q86YD1 416 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 C20orf196Q8IYI0 205 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 TMEM123Q8N131 208 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 NUP37Q8NFH4 326 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 OR6N1Q8NGY5 312 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms