RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 NPRL3Q12980 569 aa12.58□□□□□ -0.4
RTN3-214ENST00000545432 BNIP2Q12982 314 aa12.58□□□□□ -0.4
RTN3-214ENST00000545432 MAD2L1Q13257 205 aaPredicted RBP12.58□□□□□ -0.4
RTN3-214ENST00000545432 CASP8Q14790 479 aa12.58□□□□□ -0.4
RTN3-214ENST00000545432 CEACAM16Q2WEN9 425 aa12.58□□□□□ -0.4
RTN3-214ENST00000545432 PGS1Q32NB8 556 aa12.58□□□□□ -0.4
RTN3-214ENST00000545432 MIDNQ504T8 468 aa12.58□□□□□ -0.4
RTN3-214ENST00000545432 PRAMEF8Q5VWM4 474 aa12.58□□□□□ -0.4
RTN3-214ENST00000545432 PRAMEF7Q5VXH5 474 aa12.58□□□□□ -0.4
RTN3-214ENST00000545432 NHLRC1Q6VVB1 395 aa12.58□□□□□ -0.4
RTN3-214ENST00000545432 ZCCHC23Q6ZST2 131 aa12.58□□□□□ -0.4
RTN3-214ENST00000545432 DOK3Q7L591 496 aa12.58□□□□□ -0.4
RTN3-214ENST00000545432 TMEM123Q8N131 208 aa12.58□□□□□ -0.4
RTN3-214ENST00000545432 ANKFN1Q8N957 763 aa12.58□□□□□ -0.4
RTN3-214ENST00000545432 PTDSS2Q9BVG9 487 aa12.58□□□□□ -0.4
RTN3-214ENST00000545432 UNKLQ9H9P5 680 aaKnown RBP12.58□□□□□ -0.4
RTN3-214ENST00000545432 ZMAT3Q9HA38 289 aaKnown RBP12.58□□□□□ -0.4
RTN3-214ENST00000545432 ADPRHL2Q9NX46 363 aa12.58□□□□□ -0.4
RTN3-214ENST00000545432 ZNF224Q9NZL3 707 aa12.58□□□□□ -0.4
RTN3-214ENST00000545432 WNK1Q9H4A3 2382 aa12.58□□□□□ -0.4
RTN3-214ENST00000545432 PPIAL4EA0A075B759 164 aa12.57□□□□□ -0.4
RTN3-214ENST00000545432 PPIAL4CA0A0B4J2A2 164 aa12.57□□□□□ -0.4
RTN3-214ENST00000545432 PPIAL4DF5H284 164 aa12.57□□□□□ -0.4
RTN3-214ENST00000545432 SLC43A1O75387 559 aa12.57□□□□□ -0.4
RTN3-214ENST00000545432 IGHV2-5P01817 119 aa12.57□□□□□ -0.4
RTN3-214ENST00000545432 C1QCP02747 245 aa12.57□□□□□ -0.4
RTN3-214ENST00000545432 DBIP07108 87 aaKnown RBP12.57□□□□□ -0.4
RTN3-214ENST00000545432 PPIAL4FP0DN26 164 aa12.57□□□□□ -0.4
RTN3-214ENST00000545432 PNMTP11086 282 aa12.57□□□□□ -0.4
RTN3-214ENST00000545432 CRYBB2P43320 205 aa12.57□□□□□ -0.4
RTN3-214ENST00000545432 CLDN17P56750 224 aa12.57□□□□□ -0.4
RTN3-214ENST00000545432 EGR4Q05215 589 aa12.57□□□□□ -0.4
RTN3-214ENST00000545432 MAPK11Q15759 364 aa12.57□□□□□ -0.4
RTN3-214ENST00000545432 SYPL1Q16563 259 aa12.57□□□□□ -0.4
RTN3-214ENST00000545432 WHAMMP3Q1A5X7 153 aa12.57□□□□□ -0.4
RTN3-214ENST00000545432 GPAT3Q53EU6 434 aa12.57□□□□□ -0.4
RTN3-214ENST00000545432 WBP2NLQ6ICG8 309 aa12.57□□□□□ -0.4
RTN3-214ENST00000545432 BPIFB2Q8N4F0 458 aa12.57□□□□□ -0.4
RTN3-214ENST00000545432 CCDC63Q8NA47 563 aa12.57□□□□□ -0.4
RTN3-214ENST00000545432 OR4A15Q8NGL6 344 aa12.57□□□□□ -0.4
RTN3-214ENST00000545432 TESCQ96BS2 214 aa12.57□□□□□ -0.4
RTN3-214ENST00000545432 MS4A3Q96HJ5 214 aa12.57□□□□□ -0.4
RTN3-214ENST00000545432 LRR1Q96L50 414 aa12.57□□□□□ -0.4
RTN3-214ENST00000545432 C1orf147Q96MC9 270 aaPredicted RBP12.57□□□□□ -0.4
RTN3-214ENST00000545432 OXGR1Q96P68 337 aa12.57□□□□□ -0.4
RTN3-214ENST00000545432 ZIM3Q96PE6 472 aa12.57□□□□□ -0.4
RTN3-214ENST00000545432 SYT3Q9BQG1 590 aa12.57□□□□□ -0.4
RTN3-214ENST00000545432 ZNF346Q9UL40 294 aaKnown RBP12.57□□□□□ -0.4
RTN3-214ENST00000545432 IGLV3-9A0A075B6K5 115 aa12.56□□□□□ -0.4
RTN3-214ENST00000545432 COPEO14579 308 aa12.56□□□□□ -0.4
RTN3-214ENST00000545432 IL7RP16871 459 aa12.56□□□□□ -0.4
RTN3-214ENST00000545432 ZNF43P17038 809 aa12.56□□□□□ -0.4
RTN3-214ENST00000545432 ALDH3A1P30838 453 aa12.56□□□□□ -0.4
RTN3-214ENST00000545432 SERPINB5P36952 375 aa12.56□□□□□ -0.4
RTN3-214ENST00000545432 RPS23P62266 143 aaKnown RBP12.56□□□□□ -0.4
RTN3-214ENST00000545432 ZP4Q12836 540 aa12.56□□□□□ -0.4
RTN3-214ENST00000545432 GNA13Q14344 377 aa12.56□□□□□ -0.4
RTN3-214ENST00000545432 MAD2L1BPQ15013 274 aaPredicted RBP12.56□□□□□ -0.4
RTN3-214ENST00000545432 GSG1Q2KHT4 349 aa12.56□□□□□ -0.4
RTN3-214ENST00000545432 ZNF311Q5JNZ3 666 aa12.56□□□□□ -0.4
RTN3-214ENST00000545432 ANXA8L1Q5VT79 327 aa12.56□□□□□ -0.4
RTN3-214ENST00000545432 KDM8Q8N371 416 aa12.56□□□□□ -0.4
RTN3-214ENST00000545432 PIK3C3Q8NEB9 887 aa12.56□□□□□ -0.4
RTN3-214ENST00000545432 RAB39BQ96DA2 213 aa12.56□□□□□ -0.4
RTN3-214ENST00000545432 OR2M2Q96R28 347 aa12.56□□□□□ -0.4
RTN3-214ENST00000545432 GRPEL1Q9HAV7 217 aa12.56□□□□□ -0.4
RTN3-214ENST00000545432 RLIMQ9NVW2 624 aa12.56□□□□□ -0.4
RTN3-214ENST00000545432 MKS1Q9NXB0 559 aa12.56□□□□□ -0.4
RTN3-214ENST00000545432 MARCOQ9UEW3 520 aaPredicted RBP12.56□□□□□ -0.4
RTN3-214ENST00000545432 ZDHHC2Q9UIJ5 367 aa12.56□□□□□ -0.4
RTN3-214ENST00000545432 CHST2Q9Y4C5 530 aa12.56□□□□□ -0.4
RTN3-214ENST00000545432 PPIAL4AQ9Y536 164 aa12.56□□□□□ -0.4
RTN3-214ENST00000545432 C17orf100A8MU93 164 aa12.55□□□□□ -0.4
RTN3-214ENST00000545432 CLDN34H7C241 214 aa12.55□□□□□ -0.4
RTN3-214ENST00000545432 HLA-HP01893 362 aa12.55□□□□□ -0.4
RTN3-214ENST00000545432 KRT4P19013 534 aa12.55□□□□□ -0.4
RTN3-214ENST00000545432 MAGEB1P43366 347 aa12.55□□□□□ -0.4
RTN3-214ENST00000545432 IL13RA1P78552 427 aa12.55□□□□□ -0.4
RTN3-214ENST00000545432 HPCAP84074 193 aa12.55□□□□□ -0.4
RTN3-214ENST00000545432 TRMT5Q32P41 509 aaKnown RBP12.55□□□□□ -0.4
RTN3-214ENST00000545432 PHYHD1Q5SRE7 291 aa12.55□□□□□ -0.4
RTN3-214ENST00000545432 DCAF12L2Q5VW00 463 aa12.55□□□□□ -0.4
RTN3-214ENST00000545432 ANKRD46Q86W74 232 aa12.55□□□□□ -0.4
RTN3-214ENST00000545432 C20orf196Q8IYI0 205 aa12.55□□□□□ -0.4
RTN3-214ENST00000545432 GPR137CQ8N3F9 429 aa12.55□□□□□ -0.4
RTN3-214ENST00000545432 VPS37AQ8NEZ2 397 aa12.55□□□□□ -0.4
RTN3-214ENST00000545432 TUBGCP3Q96CW5 907 aa12.55□□□□□ -0.4
RTN3-214ENST00000545432 C7orf69Q9H7B7 122 aa12.55□□□□□ -0.4
RTN3-214ENST00000545432 MED29Q9NX70 200 aa12.55□□□□□ -0.4
RTN3-214ENST00000545432 NOP53Q9NZM5 478 aaKnown RBP12.55□□□□□ -0.4
RTN3-214ENST00000545432 TRAF3IP2O43734 574 aaPredicted RBP12.54□□□□□ -0.4
RTN3-214ENST00000545432 CPSF4O95639 269 aaKnown RBP12.54□□□□□ -0.4
RTN3-214ENST00000545432 FAM153BP0C7A2 387 aa12.54□□□□□ -0.4
RTN3-214ENST00000545432 GKN3PP0CG01 181 aa12.54□□□□□ -0.4
RTN3-214ENST00000545432 NAT2P11245 290 aa12.54□□□□□ -0.4
RTN3-214ENST00000545432 ZNF250P15622 560 aa12.54□□□□□ -0.4
RTN3-214ENST00000545432 PCGF3Q3KNV8 242 aa12.54□□□□□ -0.4
RTN3-214ENST00000545432 RNF220Q5VTB9 566 aa12.54□□□□□ -0.4
RTN3-214ENST00000545432 C6orf89Q6UWU4 347 aa12.54□□□□□ -0.4
RTN3-214ENST00000545432 RNF130Q86XS8 419 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms