RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 CWH43Q9H720 699 aa3.99□□□□□ -1.77
SNHG1-219ENST00000542112 METTL17Q9H7H0 456 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-219ENST00000542112 SDR39U1Q9NRG7 319 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-219ENST00000542112 ADARB2Q9NS39 739 aaKnown RBP3.99□□□□□ -1.77
SNHG1-219ENST00000542112 LYRM2Q9NU23 88 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-219ENST00000542112 TDP1Q9NUW8 608 aa3.99□□□□□ -1.77
SNHG1-219ENST00000542112 TMEM100Q9NV29 134 aa3.99□□□□□ -1.77
SNHG1-219ENST00000542112 DMAC2Q9NW81 257 aa3.99□□□□□ -1.77
SNHG1-219ENST00000542112 C1orf109Q9NX04 203 aa3.99□□□□□ -1.77
SNHG1-219ENST00000542112 BARHL2Q9NY43 387 aa3.99□□□□□ -1.77
SNHG1-219ENST00000542112 CCDC167Q9P0B6 97 aa3.99□□□□□ -1.77
SNHG1-219ENST00000542112 RCC2Q9P258 522 aaKnown RBP3.99□□□□□ -1.77
SNHG1-219ENST00000542112 KLHL8Q9P2G9 620 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-219ENST00000542112 MGAT4CQ9UBM8 478 aa3.99□□□□□ -1.77
SNHG1-219ENST00000542112 UPB1Q9UBR1 384 aa3.99□□□□□ -1.77
SNHG1-219ENST00000542112 RPS6KB2Q9UBS0 482 aa3.99□□□□□ -1.77
SNHG1-219ENST00000542112 PLEKHB1Q9UF11 243 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-219ENST00000542112 OR14J1Q9UGF5 321 aa3.99□□□□□ -1.77
SNHG1-219ENST00000542112 PADI1Q9ULC6 663 aa3.99□□□□□ -1.77
SNHG1-219ENST00000542112 FZD4Q9ULV1 537 aa3.99□□□□□ -1.77
SNHG1-219ENST00000542112 FAM96BQ9Y3D0 163 aa3.99□□□□□ -1.77
SNHG1-219ENST00000542112 WIF1Q9Y5W5 379 aa3.99□□□□□ -1.77
SNHG1-219ENST00000542112 SPIN1Q9Y657 262 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-219ENST00000542112 COLEC10Q9Y6Z7 277 aa3.99□□□□□ -1.77
SNHG1-219ENST00000542112 TRAV19A0A0A6YYK7 116 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 TGIF2-C20orf24A0A0A6YYL0 155 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 LOC102723532A0A0G2JNH3 316 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 GGT3PA6NGU5 568 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 TMEM200CA6NKL6 621 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 OR52A4PA6NMU1 304 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 CXorf49A8MYA2 514 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-219ENST00000542112 FAM86B1E9PN63 330 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 TNFRSF11BO00300 401 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 PHOX2AO14813 284 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 FFAR3O14843 346 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 GPR42O15529 346 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 CYB5BO43169 146 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 TCF21O43680 179 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 GSTZ1O43708 216 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-219ENST00000542112 CDC40O60508 579 aaKnown RBP eCLIP3.98□□□□□ -1.775e-11■□□□□ 11.3
SNHG1-219ENST00000542112 CREBL2O60519 120 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-219ENST00000542112 PRAMEF4O60810 478 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 MPIG6BO95866 241 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 TOMM40O96008 361 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 KNG1P01042 644 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 TK1P04183 234 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 LIPFP07098 398 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 ERCC1P07992 297 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-219ENST00000542112 IL6RP08887 468 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-219ENST00000542112 CST2P09228 141 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 SLC35G4P0C7Q5 338 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 STAG3L2P0CL84 134 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 GIMD1P0DJR0 217 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 CD79AP11912 226 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 FOLR1P15328 257 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 CXCL3P19876 107 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 ZNF10P21506 573 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-219ENST00000542112 HRH2P25021 359 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 MST1P26927 711 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 AKT2P31751 481 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 CRYBB2P43320 205 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 BDKRB1P46663 353 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 NDUFV1P49821 464 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 CSRP3P50461 194 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 AFF3P51826 1226 aaKnown RBP3.98□□□□□ -1.77
SNHG1-219ENST00000542112 PTTG1IPP53801 180 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 SOX10P56693 466 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 WNT3P56703 355 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 CLDN12P56749 244 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 SESN2P58004 480 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-219ENST00000542112 TRA2BP62995 288 aaKnown RBP3.98□□□□□ -1.77
SNHG1-219ENST00000542112 HBA1P69905 142 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 NKX6-1P78426 367 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-219ENST00000542112 CDK6Q00534 326 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 SRSF2Q01130 221 aaKnown RBP3.98□□□□□ -1.77
SNHG1-219ENST00000542112 ZNF616Q08AN1 781 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 SLAQ13239 276 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 HTR4Q13639 388 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 ARL6IP1Q15041 203 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 RAB35Q15286 201 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 ADIPOQQ15848 244 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 TSTQ16762 297 aaKnown RBP3.98□□□□□ -1.77
SNHG1-219ENST00000542112 ALG10BQ5I7T1 473 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 NCMAPQ5T1S8 102 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 GCNT6Q5T4J0 391 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 C1orf194Q5T5A4 169 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 PLAG1Q6DJT9 500 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 OR6B2Q6IFH4 312 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 GRHL2Q6ISB3 625 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 ZNF774Q6NX45 483 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 FAHD1Q6P587 224 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 SLC39A4Q6P5W5 647 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 CNIH2Q6PI25 160 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 DNM1P34Q6PK57 102 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 USP17L6PQ6QN14 398 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 MPZL3Q6UWV2 235 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 ZNF836Q6ZNA1 936 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 FAM83HQ6ZRV2 1179 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-219ENST00000542112 MON1BQ7L1V2 547 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 NDUFAF7Q7L592 441 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms