RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 SERPINI2O75830 405 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 AQP8O94778 261 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 RCBTB2O95199 551 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 TGM6O95932 706 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 PLGP00747 810 aaPredicted RBP8.33□□□□□ -1.08
DDX55-208ENST00000541259 TPOP07202 933 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 EDN3P14138 238 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 AHCYP23526 432 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 GTF2E2P29084 291 aaKnown RBP8.33□□□□□ -1.08
DDX55-208ENST00000541259 CRISP1P54107 249 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 ZP4Q12836 540 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 NPRL3Q12980 569 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 MFSD13AQ14CX5 517 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 PON3Q15166 354 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 RFX4Q33E94 735 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 CLEC12AQ5QGZ9 265 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 SMARCD3Q6STE5 483 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 PAQR6Q6TCH4 344 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 IZUMO2Q6UXV1 221 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 NHLRC1Q6VVB1 395 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 C3P1Q6ZMU1 363 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 FCRLAQ7L513 359 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 CHMP1BQ7LBR1 199 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 ADGRE4PQ86SQ3 457 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 CD163Q86VB7 1156 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 WDFY1Q8IWB7 410 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 PM20D2Q8IYS1 436 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 PARP8Q8N3A8 854 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 IQCF1Q8N6M8 205 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 SCAIQ8N9R8 606 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 OR4Q3Q8NH05 313 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 FNDC9Q8TBE3 224 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 FAM57AQ8TBR7 257 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 FANK1Q8TC84 345 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 ZPLD1Q8TCW7 415 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 DNAJC9Q8WXX5 260 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 CPNE4Q96A23 557 aaPredicted RBP8.33□□□□□ -1.08
DDX55-208ENST00000541259 ZNF775Q96BV0 537 aaPredicted RBP8.33□□□□□ -1.08
DDX55-208ENST00000541259 TRIB1Q96RU8 372 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 TACO1Q9BSH4 297 aaKnown RBP8.33□□□□□ -1.08
DDX55-208ENST00000541259 NAA11Q9BSU3 229 aaPredicted RBP8.33□□□□□ -1.08
DDX55-208ENST00000541259 TSSK6Q9BXA6 273 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 TIGARQ9NQ88 270 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 TBC1D23Q9NUY8 699 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 SMPD3Q9NY59 655 aaPredicted RBP8.33□□□□□ -1.08
DDX55-208ENST00000541259 IL20Q9NYY1 176 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 B3GAT1Q9P2W7 334 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 B3GALT5Q9Y2C3 310 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 CORINQ9Y5Q5 1042 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 CDH10Q9Y6N8 788 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 CFAP46Q8IYW2 2715 aa8.33□□□□□ -1.08
DDX55-208ENST00000541259 ZNF716A6NP11 495 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 AHRRA9YTQ3 701 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 E9PQ18 207 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 H3BN98 237 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 RNF13O43567 381 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 DNPH1O43598 174 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 CYTIPO60759 359 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 NDUFB2O95178 105 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 OR6A2O95222 327 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 SYNGR4O95473 234 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 PPP1R3DO95685 299 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 ABOP16442 354 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 RAD23AP54725 363 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 CTXN1P60606 82 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 PRPS1P60891 318 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 ESRRGP62508 458 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 ERVK-25P63136 954 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 CDK5Q00535 292 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 PUDPQ08623 228 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 GINS1Q14691 196 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 PTGES3Q15185 160 aaKnown RBP8.32□□□□□ -1.08
DDX55-208ENST00000541259 ACSF3Q4G176 576 aaPredicted RBP8.32□□□□□ -1.08
DDX55-208ENST00000541259 ALG10Q5BKT4 473 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 TMEM225Q6GV28 225 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 ABLIM2Q6H8Q1 611 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 RTL6Q6ICC9 239 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 ACSM5Q6NUN0 579 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 RPTNQ6XPR3 784 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 GPAT4Q86UL3 456 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 DOLPP1Q86YN1 238 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 RPRMLQ8N4K4 120 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 CLDN22Q8N7P3 220 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 LSM14AQ8ND56 463 aaKnown RBP8.32□□□□□ -1.08
DDX55-208ENST00000541259 ADPRHL1Q8NDY3 354 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 ABHD3Q8WU67 409 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 ZHX1-C8orf76Q96EF9 292 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 TXNDC15Q96J42 360 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 ZNF570Q96NI8 536 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 OXGR1Q96P68 337 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 IFT27Q9BW83 186 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 GABARAPL3Q9BY60 117 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 RASSF4Q9H2L5 321 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 C8orf4Q9NR00 106 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 INIPQ9NRY2 104 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 FAM118AQ9NWS6 357 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 CLCF1Q9UBD9 225 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 ING1Q9UK53 422 aaPredicted RBP8.32□□□□□ -1.08
DDX55-208ENST00000541259 RALYQ9UKM9 306 aaKnown RBP8.32□□□□□ -1.08
DDX55-208ENST00000541259 CLEC4AQ9UMR7 237 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms