RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 ANKDD1AQ495B1 522 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 SLC35F1Q5T1Q4 408 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 ACSM5Q6NUN0 579 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 ARHGAP11AQ6P4F7 1023 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 CLEC18BQ6UXF7 455 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 USP51Q70EK9 711 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 H1FNTQ75WM6 255 aaPredicted RBP12.67□□□□□ -0.38
CD4-208ENST00000538827 SLC43A2Q8N370 569 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 TMEM99Q8N816 258 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 TEX19Q8NA77 164 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 CLEC18CQ8NCF0 446 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 ERMAPQ96PL5 475 aaPredicted RBP12.67□□□□□ -0.38
CD4-208ENST00000538827 PSMG3-AS1Q96PY0 264 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 NAA11Q9BSU3 229 aaPredicted RBP12.67□□□□□ -0.38
CD4-208ENST00000538827 RASSF1Q9NS23 344 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 BAIAP2Q9UQB8 552 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 TRAPPC4Q9Y296 219 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 IER3IP1Q9Y5U9 82 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 DNAJC13O75165 2243 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 BSNQ9UPA5 3926 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 TEX13CA0A0J9YWL9 993 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 AQP7P3A6NL99 342 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 BHLHE40O14503 412 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 IGHG3P01860 377 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 ENPP1P22413 925 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 GIPRP48546 466 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 RPS6KA3P51812 740 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 CLDN15P56746 228 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 CARD18P57730 90 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 CDK5Q00535 292 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 MYBPC1Q00872 1141 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 POU3F1Q03052 451 aaPredicted RBP12.66□□□□□ -0.38
CD4-208ENST00000538827 TLE1Q04724 770 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 MELKQ14680 651 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 DPY19L2P2Q6ZN68 376 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 PTCHD4Q6ZW05 846 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 CHMP1BQ7LBR1 199 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 THAP5Q7Z6K1 395 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 GPAT4Q86UL3 456 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 CCDC71Q8IV32 467 aaPredicted RBP12.66□□□□□ -0.38
CD4-208ENST00000538827 SIAH3Q8IW03 269 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 KDM8Q8N371 416 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 CNIH3Q8TBE1 160 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 OTULINQ96BN8 352 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 RASD2Q96D21 266 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 ZNF845Q96IR2 970 aaPredicted RBP12.66□□□□□ -0.38
CD4-208ENST00000538827 TIGARQ9NQ88 270 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 KLHL13Q9P2N7 655 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 AASSQ9UDR5 926 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 RNF6Q9Y252 685 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 ADAM18Q9Y3Q7 739 aa12.66□□□□□ -0.38
CD4-208ENST00000538827 A0A1W2PNV4 684 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 A0A1W2PRG6 482 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 RIIAD1A6NNX1 92 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 ZNF814B7Z6K7 855 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 E9PQ18 207 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 AQP7O14520 342 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 SYNGR4O95473 234 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 IFNGP01579 166 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 HMGN1P05114 100 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 CD14P08571 375 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 PCYT1AP49585 367 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 CD47Q08722 323 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 KRR1Q13601 381 aaKnown RBP12.65□□□□□ -0.38
CD4-208ENST00000538827 C1DQ13901 141 aaKnown RBP12.65□□□□□ -0.38
CD4-208ENST00000538827 MAD2L1BPQ15013 274 aaPredicted RBP12.65□□□□□ -0.38
CD4-208ENST00000538827 VASNQ6EMK4 673 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 PAQR6Q6TCH4 344 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 JAZF1Q86VZ6 243 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 UEVLDQ8IX04 471 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 ENTHD1Q8IYW4 607 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 GHDCQ8N2G8 530 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 MARVELD2Q8N4S9 558 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 CISD2Q8N5K1 135 aaKnown RBP12.65□□□□□ -0.38
CD4-208ENST00000538827 TCEANCQ8N8B7 351 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 Q8NA96 180 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 LRRC75AQ8NAA5 344 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 ADPRHL1Q8NDY3 354 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 SDR9C7Q8NEX9 313 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 ANKK1Q8NFD2 765 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 CPNE4Q96A23 557 aaPredicted RBP12.65□□□□□ -0.38
CD4-208ENST00000538827 ADGRG7Q96K78 797 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 Q96M85 177 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 TSPAN32Q96QS1 320 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 UCN2Q96RP3 112 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 IL4I1Q96RQ9 567 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 GPX7Q96SL4 187 aaPredicted RBP12.65□□□□□ -0.38
CD4-208ENST00000538827 ZNF226Q9NYT6 803 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 TAS2R5Q9NYW4 299 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 B3GALT5Q9Y2C3 310 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 GPR52Q9Y2T5 361 aa12.65□□□□□ -0.38
CD4-208ENST00000538827 SPTBN1Q01082 2364 aaKnown RBP12.65□□□□□ -0.38
CD4-208ENST00000538827 A0A1B0GTH9 108 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 NPIPA2E9PIF3 369 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 NPIPA3F8WFD2 350 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 SMAD9O15198 467 aaKnown RBP12.64□□□□□ -0.39
CD4-208ENST00000538827 SURF4O15260 269 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 ZNHIT1O43257 154 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 DNPH1O43598 174 aa12.64□□□□□ -0.39
CD4-208ENST00000538827 PRKYO43930 277 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms