RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 UEVLDQ8IX04 471 aa9.13□□□□□ -0.95
CAPN1-225ENST00000533704 MUC15Q8N387 334 aa9.13□□□□□ -0.95
CAPN1-225ENST00000533704 TSPEARQ8WU66 669 aa9.13□□□□□ -0.95
CAPN1-225ENST00000533704 HTRA1Q92743 480 aa9.13□□□□□ -0.95
CAPN1-225ENST00000533704 ADAD1Q96M93 576 aaKnown RBP9.13□□□□□ -0.95
CAPN1-225ENST00000533704 ARHGDIGQ99819 225 aa9.13□□□□□ -0.95
CAPN1-225ENST00000533704 ASPNQ9BXN1 380 aa9.13□□□□□ -0.95
CAPN1-225ENST00000533704 CBLN4Q9NTU7 201 aa9.13□□□□□ -0.95
CAPN1-225ENST00000533704 B3GAT1Q9P2W7 334 aa9.13□□□□□ -0.95
CAPN1-225ENST00000533704 MOKQ9UQ07 419 aa9.13□□□□□ -0.95
CAPN1-225ENST00000533704 B3GALT5Q9Y2C3 310 aa9.13□□□□□ -0.95
CAPN1-225ENST00000533704 RTTNQ86VV8 2226 aa9.13□□□□□ -0.95
CAPN1-225ENST00000533704 M0R3G1 203 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 KPNA4O00629 521 aaPredicted RBP9.12□□□□□ -0.95
CAPN1-225ENST00000533704 FBP2O00757 339 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 MRASO14807 208 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 SEC14L2O76054 403 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 HPRP00739 348 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 BGLAPP02818 100 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 AHCYP23526 432 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 PCGF2P35227 344 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 CAPZA2P47755 286 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 NUDT6P53370 316 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 PCBP3P57721 371 aaKnown RBP9.12□□□□□ -0.95
CAPN1-225ENST00000533704 ARF1P84077 181 aaKnown RBP9.12□□□□□ -0.95
CAPN1-225ENST00000533704 PPP2R2BQ00005 443 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 POU3F1Q03052 451 aaPredicted RBP9.12□□□□□ -0.95
CAPN1-225ENST00000533704 CYLC2Q14093 348 aaPredicted RBP9.12□□□□□ -0.95
CAPN1-225ENST00000533704 MFSD13AQ14CX5 517 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 NPTX1Q15818 432 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 ETFDHQ16134 617 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 DUSP7Q16829 419 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 RABL3Q5HYI8 236 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 INTS11Q5TA45 600 aaKnown RBP9.12□□□□□ -0.95
CAPN1-225ENST00000533704 PATL1Q86TB9 770 aaKnown RBP9.12□□□□□ -0.95
CAPN1-225ENST00000533704 SNX32Q86XE0 403 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 RBM45Q8IUH3 476 aaKnown RBP9.12□□□□□ -0.95
CAPN1-225ENST00000533704 SLC30A8Q8IWU4 369 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 GPR32P1Q8NGA4 272 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 OR6T1Q8NGN1 323 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 BCL2L2Q92843 193 aaPredicted RBP9.12□□□□□ -0.95
CAPN1-225ENST00000533704 TAMM41Q96BW9 452 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 MOGAT1Q96PD6 335 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 ECSITQ9BQ95 431 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 EMC6Q9BV81 110 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 LINC00470Q9BZP3 86 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 KAT8Q9H7Z6 458 aaKnown RBP9.12□□□□□ -0.95
CAPN1-225ENST00000533704 BARX1Q9HBU1 254 aaPredicted RBP9.12□□□□□ -0.95
CAPN1-225ENST00000533704 GPR35Q9HC97 309 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 RCE1Q9Y256 329 aa9.12□□□□□ -0.95
CAPN1-225ENST00000533704 CHD3Q12873 2000 aaKnown RBP9.12□□□□□ -0.95
CAPN1-225ENST00000533704 YLPM1P49750 1951 aaKnown RBP9.12□□□□□ -0.95
CAPN1-225ENST00000533704 IGHV1-18A0A0C4DH31 117 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 LOC100653049A0A140TA62 436 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 ZNF726A6NNF4 738 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 C11orf98E9PRG8 122 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 MS4A18H0YCH9 400 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 TRAF3IP2O43734 574 aaPredicted RBP9.11□□□□□ -0.95
CAPN1-225ENST00000533704 KRT34O76011 436 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 ZNF432O94892 652 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 OR6A2O95222 327 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 HLA-DOBP13765 273 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 SH3BGRP55822 239 aaPredicted RBP9.11□□□□□ -0.95
CAPN1-225ENST00000533704 GUCY1A3Q02108 690 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 KLF10Q13118 480 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 RAB35Q15286 201 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 MAPRE2Q15555 327 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 NRF1Q16656 503 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 VMACQ2NL98 169 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 CEACAM16Q2WEN9 425 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 MS4A18Q3C1V0 323 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 HSP90B2PQ58FF3 399 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 ENTPD8Q5MY95 495 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 SWT1Q5T5J6 900 aaKnown RBP9.11□□□□□ -0.95
CAPN1-225ENST00000533704 REP15Q6BDI9 236 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 NANOGP8Q6NSW7 305 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 CGB2Q6NT52 195 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 ANKRD16Q6P6B7 361 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 ZNF613Q6PF04 617 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 VHLLQ6RSH7 139 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 PIK3C3Q8NEB9 887 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 OR4D11Q8NGI4 311 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 LRRC58Q96CX6 371 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 FBXO17Q96EF6 278 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 SLC38A2Q96QD8 506 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 OR2M2Q96R28 347 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 SH3GL1Q99961 368 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 TMEM43Q9BTV4 400 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 REG4Q9BYZ8 158 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 EVA1AQ9H8M9 152 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 NANOGQ9H9S0 305 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 CRLF2Q9HC73 371 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 OBP2BQ9NPH6 170 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 ZNF446Q9NWS9 450 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 MED29Q9NX70 200 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 SLC7A7Q9UM01 511 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 CORINQ9Y5Q5 1042 aa9.11□□□□□ -0.95
CAPN1-225ENST00000533704 INAFM1C9JVW0 142 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 CHP2O43745 196 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 FMO6PO60774 539 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms