RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 SNTB2Q13425 540 aaKnown RBP20.34■□□□□ 0.85
CPSF1-202ENST00000527827 MSMPQ1L6U9 139 aa20.34■□□□□ 0.85
CPSF1-202ENST00000527827 GPR137CQ8N3F9 429 aa20.34■□□□□ 0.85
CPSF1-202ENST00000527827 OR2M2Q96R28 347 aa20.34■□□□□ 0.85
CPSF1-202ENST00000527827 NOX3Q9HBY0 568 aa20.34■□□□□ 0.85
CPSF1-202ENST00000527827 CRLF2Q9HC73 371 aa20.34■□□□□ 0.85
CPSF1-202ENST00000527827 SEC14L2O76054 403 aa20.33■□□□□ 0.85
CPSF1-202ENST00000527827 IL6P05231 212 aa20.33■□□□□ 0.85
CPSF1-202ENST00000527827 GTF2E2P29084 291 aaKnown RBP20.33■□□□□ 0.85
CPSF1-202ENST00000527827 DVL1P1P54792 670 aaPredicted RBP20.33■□□□□ 0.85
CPSF1-202ENST00000527827 DAG1Q14118 895 aa20.33■□□□□ 0.85
CPSF1-202ENST00000527827 PHYHD1Q5SRE7 291 aa20.33■□□□□ 0.85
CPSF1-202ENST00000527827 KRT80Q6KB66 452 aa20.33■□□□□ 0.85
CPSF1-202ENST00000527827 C6orf89Q6UWU4 347 aa20.33■□□□□ 0.85
CPSF1-202ENST00000527827 TMEM123Q8N131 208 aa20.33■□□□□ 0.85
CPSF1-202ENST00000527827 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20.33■□□□□ 0.85
CPSF1-202ENST00000527827 IL17RDQ8NFM7 739 aa20.33■□□□□ 0.85
CPSF1-202ENST00000527827 VPS33AQ96AX1 596 aa20.33■□□□□ 0.85
CPSF1-202ENST00000527827 TPK1Q9H3S4 243 aa20.33■□□□□ 0.85
CPSF1-202ENST00000527827 ARMC7Q9H6L4 198 aa20.33■□□□□ 0.85
CPSF1-202ENST00000527827 B3GNT2Q9NY97 397 aa20.33■□□□□ 0.85
CPSF1-202ENST00000527827 USP22Q9UPT9 525 aa20.33■□□□□ 0.85
CPSF1-202ENST00000527827 IFT52Q9Y366 437 aa20.33■□□□□ 0.85
CPSF1-202ENST00000527827 TENM1Q9UKZ4 2725 aa20.33■□□□□ 0.85
CPSF1-202ENST00000527827 M0R082 166 aa20.32■□□□□ 0.84
CPSF1-202ENST00000527827 POU3F1Q03052 451 aaPredicted RBP20.32■□□□□ 0.84
CPSF1-202ENST00000527827 C1DQ13901 141 aaKnown RBP20.32■□□□□ 0.84
CPSF1-202ENST00000527827 CCNIQ14094 377 aa20.32■□□□□ 0.84
CPSF1-202ENST00000527827 PDCD4Q53EL6 469 aaKnown RBP20.32■□□□□ 0.84
CPSF1-202ENST00000527827 ZNF311Q5JNZ3 666 aa20.32■□□□□ 0.84
CPSF1-202ENST00000527827 CCDC36Q8IYA8 594 aa20.32■□□□□ 0.84
CPSF1-202ENST00000527827 ZNF417Q8TAU3 575 aa20.32■□□□□ 0.84
CPSF1-202ENST00000527827 TAAR8Q969N4 342 aa20.32■□□□□ 0.84
CPSF1-202ENST00000527827 ZNF587Q96SQ5 575 aaPredicted RBP20.32■□□□□ 0.84
CPSF1-202ENST00000527827 RSPO3Q9BXY4 272 aaPredicted RBP20.32■□□□□ 0.84
CPSF1-202ENST00000527827 CMAHPQ9Y471 501 aa20.32■□□□□ 0.84
CPSF1-202ENST00000527827 ZNF99A8MXY4 864 aaPredicted RBP20.31■□□□□ 0.84
CPSF1-202ENST00000527827 AIM2O14862 343 aa20.31■□□□□ 0.84
CPSF1-202ENST00000527827 TRAF3IP2O43734 574 aaPredicted RBP20.31■□□□□ 0.84
CPSF1-202ENST00000527827 SLC22A3O75751 556 aa20.31■□□□□ 0.84
CPSF1-202ENST00000527827 ANP32DO95626 131 aa20.31■□□□□ 0.84
CPSF1-202ENST00000527827 NUDT7P0C024 238 aa20.31■□□□□ 0.84
CPSF1-202ENST00000527827 NR4A1P22736 598 aa20.31■□□□□ 0.84
CPSF1-202ENST00000527827 CAPZA2P47755 286 aa20.31■□□□□ 0.84
CPSF1-202ENST00000527827 IL1RL1Q01638 556 aa20.31■□□□□ 0.84
CPSF1-202ENST00000527827 UGT2A3Q6UWM9 527 aa20.31■□□□□ 0.84
CPSF1-202ENST00000527827 RINLQ6ZS11 566 aa20.31■□□□□ 0.84
CPSF1-202ENST00000527827 PIK3C3Q8NEB9 887 aa20.31■□□□□ 0.84
CPSF1-202ENST00000527827 SLC35B4Q969S0 331 aa20.31■□□□□ 0.84
CPSF1-202ENST00000527827 MRPL24Q96A35 216 aaKnown RBP20.31■□□□□ 0.84
CPSF1-202ENST00000527827 MRPL37Q9BZE1 423 aaKnown RBP20.31■□□□□ 0.84
CPSF1-202ENST00000527827 BCL2L10Q9HD36 194 aa20.31■□□□□ 0.84
CPSF1-202ENST00000527827 DYSFO75923 2080 aa20.3■□□□□ 0.84
CPSF1-202ENST00000527827 LOC102725191A0A1B0GVB3 256 aa20.3■□□□□ 0.84
CPSF1-202ENST00000527827 HDAC3O15379 428 aa20.3■□□□□ 0.84
CPSF1-202ENST00000527827 GRPRP30550 384 aa20.3■□□□□ 0.84
CPSF1-202ENST00000527827 TNFAIP8L3Q5GJ75 292 aa20.3■□□□□ 0.84
CPSF1-202ENST00000527827 ELFN2Q5R3F8 820 aa20.3■□□□□ 0.84
CPSF1-202ENST00000527827 FAM69AQ5T7M9 428 aa20.3■□□□□ 0.84
CPSF1-202ENST00000527827 MREGQ8N565 214 aa20.3■□□□□ 0.84
CPSF1-202ENST00000527827 MS4A3Q96HJ5 214 aa20.3■□□□□ 0.84
CPSF1-202ENST00000527827 ZNF75AQ96N20 296 aa20.3■□□□□ 0.84
CPSF1-202ENST00000527827 C12orf10Q9HB07 376 aa20.3■□□□□ 0.84
CPSF1-202ENST00000527827 CACYBPQ9HB71 228 aaKnown RBP20.3■□□□□ 0.84
CPSF1-202ENST00000527827 KCNK9Q9NPC2 374 aa20.3■□□□□ 0.84
CPSF1-202ENST00000527827 THUMPD1Q9NXG2 353 aaKnown RBP20.3■□□□□ 0.84
CPSF1-202ENST00000527827 IGKV1D-42A0A075B6H8 117 aa20.29■□□□□ 0.84
CPSF1-202ENST00000527827 MS4A18H0YCH9 400 aa20.29■□□□□ 0.84
CPSF1-202ENST00000527827 M0R3G1 203 aa20.29■□□□□ 0.84
CPSF1-202ENST00000527827 OR2T1O43869 369 aa20.29■□□□□ 0.84
CPSF1-202ENST00000527827 VENTXO95231 258 aa20.29■□□□□ 0.84
CPSF1-202ENST00000527827 HLA-HP01893 362 aa20.29■□□□□ 0.84
CPSF1-202ENST00000527827 IDO1P14902 403 aa20.29■□□□□ 0.84
CPSF1-202ENST00000527827 HTR2AP28223 471 aa20.29■□□□□ 0.84
CPSF1-202ENST00000527827 EVX1P49640 407 aa20.29■□□□□ 0.84
CPSF1-202ENST00000527827 MS4A18Q3C1V0 323 aa20.29■□□□□ 0.84
CPSF1-202ENST00000527827 H1FNTQ75WM6 255 aaPredicted RBP20.29■□□□□ 0.84
CPSF1-202ENST00000527827 CARM1Q86X55 608 aa20.29■□□□□ 0.84
CPSF1-202ENST00000527827 SLC38A4Q969I6 547 aa20.29■□□□□ 0.84
CPSF1-202ENST00000527827 MAL2Q969L2 176 aa20.29■□□□□ 0.84
CPSF1-202ENST00000527827 ITCHQ96J02 903 aa20.29■□□□□ 0.84
CPSF1-202ENST00000527827 RPS6KB2Q9UBS0 482 aa20.29■□□□□ 0.84
CPSF1-202ENST00000527827 REV1Q9UBZ9 1251 aa20.29■□□□□ 0.84
CPSF1-202ENST00000527827 METRNQ9UJH8 293 aa20.29■□□□□ 0.84
CPSF1-202ENST00000527827 TMEM247A6NEH6 219 aa20.28■□□□□ 0.84
CPSF1-202ENST00000527827 TRPC5OSA6NMA1 111 aa20.28■□□□□ 0.84
CPSF1-202ENST00000527827 B4DSR2 109 aa20.28■□□□□ 0.84
CPSF1-202ENST00000527827 SYNGR3O43761 229 aa20.28■□□□□ 0.84
CPSF1-202ENST00000527827 AKAP8O43823 692 aaKnown RBP20.28■□□□□ 0.84
CPSF1-202ENST00000527827 HPRP00739 348 aa20.28■□□□□ 0.84
CPSF1-202ENST00000527827 ZNF35P13682 527 aa20.28■□□□□ 0.84
CPSF1-202ENST00000527827 HLA-DOBP13765 273 aa20.28■□□□□ 0.84
CPSF1-202ENST00000527827 ZNF14P17017 642 aaPredicted RBP20.28■□□□□ 0.84
CPSF1-202ENST00000527827 CBLP22681 906 aa20.28■□□□□ 0.84
CPSF1-202ENST00000527827 RUNX1T1Q06455 604 aa20.28■□□□□ 0.84
CPSF1-202ENST00000527827 RGNQ15493 299 aa20.28■□□□□ 0.84
CPSF1-202ENST00000527827 CARD17Q5XLA6 110 aa20.28■□□□□ 0.84
CPSF1-202ENST00000527827 NXNQ6DKJ4 435 aa20.28■□□□□ 0.84
CPSF1-202ENST00000527827 WDR93Q6P2C0 686 aa20.28■□□□□ 0.84
CPSF1-202ENST00000527827 C5orf46Q6UWT4 87 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms