RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 UBDO15205 165 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 TBX19O60806 448 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 PRAMEF2O60811 474 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 FCGR3BO75015 233 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 SAP30O75446 220 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 ATP1B1P05026 303 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 LINGO3P0C6S8 592 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 TMEM225BP0DP42 221 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 SPTBP11277 2137 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 LAMP1P11279 417 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 BMP7P18075 431 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 NCF2P19878 526 aaPredicted RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 PRPS1L1P21108 318 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 PAICSP22234 425 aaKnown RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 CYB561P49447 251 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 ENTPD1P49961 510 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 GPR143P51810 404 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 NR0B1P51843 470 aaKnown RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 SUCLG1P53597 346 aaKnown RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 MLLT10P55197 1068 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 CLDN8P56748 225 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 SLC37A1P57057 533 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 LOXL3P58215 753 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 ZNF155Q12901 538 aaPredicted RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 TNK1Q13470 666 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 TUBA3CQ13748 450 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 ZNF169Q14929 603 aaPredicted RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 OR1C1Q15619 314 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 NNATQ16517 81 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 HIKESHIQ53FT3 197 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 PIGGQ5H8A4 983 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 H3F3CQ6NXT2 135 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 TUBA3EQ6PEY2 450 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 EPGNQ6UW88 154 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 TMEM107Q6UX40 140 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 IGFL3Q6UXB1 125 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 IL20RBQ6UXL0 311 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 TMEM64Q6YI46 380 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 DOK3Q7L591 496 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 ZNF551Q7Z340 670 aaPredicted RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 NANOGNBQ7Z5D8 188 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 MTERF4Q7Z6M4 381 aaKnown RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 HPS6Q86YV9 775 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 NKAIN4Q8IVV8 208 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 SIAH3Q8IW03 269 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 C9orf40Q8IXQ3 194 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 PRR22Q8IZ63 422 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 GHDCQ8N2G8 530 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 ZNF843Q8N446 348 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 RNF148Q8N7C7 305 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 RBMXL3Q8N7X1 1067 aaKnown RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 MINDY2Q8NBR6 621 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 OR7G1Q8NGA0 311 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 B4GALNT2Q8NHY0 566 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 ZFP28Q8NHY6 868 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 OIT3Q8WWZ8 545 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 DPF1Q92782 380 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 HAS2Q92819 552 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 TMEM125Q96AQ2 219 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 MTERF3Q96E29 417 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 ZBED6CLQ96FA7 236 aaPredicted RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 OTUB1Q96FW1 271 aaPredicted RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 CHMP6Q96FZ7 201 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 C4orf36Q96KX1 117 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 ZNF681Q96N22 645 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 AMDHD1Q96NU7 426 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 PANX1Q96RD7 426 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 NPAS2Q99743 824 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 DUSP26Q9BV47 211 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 WWTR1Q9GZV5 400 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 MAGT1Q9H0U3 335 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 TOR3AQ9H497 397 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 GLIPR2Q9H4G4 154 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 SAP30LQ9HAJ7 183 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 C3orf14Q9HBI5 128 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 EQTNQ9NQ60 294 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 SDHAF3Q9NRP4 125 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 TAS2R9Q9NYW1 312 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 PRODH2Q9UF12 536 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 IL20RAQ9UHF4 553 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 CFL2Q9Y281 166 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 MRPS7Q9Y2R9 242 aaKnown RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 YARS2Q9Y2Z4 477 aaKnown RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 OR10H1Q9Y4A9 318 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 CSAG2Q9Y5P2 127 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 ATMQ13315 3056 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 LOC400499M0QZD8 3231 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 ANKRD12Q6UB98 2062 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 A0A0G2JND7 137 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 A0A0U1RRA0 63 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 TMEM200CA6NKL6 621 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 ZAR1LA6NP61 321 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 G3V3Y1 287 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 UPK1AO00322 258 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 SCAMP2O15127 329 aaKnown RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 OGG1O15527 345 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 ARHGEF9O43307 516 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 SLC28A2O43868 658 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 EDF1O60869 148 aaKnown RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 REM1O75628 298 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms