RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 POMGNT2Q8NAT1 580 aa7.11□□□□□ -1.27
SCARNA20.3-201ENST00000516913 NUP37Q8NFH4 326 aa7.11□□□□□ -1.27
SCARNA20.3-201ENST00000516913 OR4D11Q8NGI4 311 aa7.11□□□□□ -1.27
SCARNA20.3-201ENST00000516913 MFSD8Q8NHS3 518 aa7.11□□□□□ -1.27
SCARNA20.3-201ENST00000516913 TAF15Q92804 592 aaKnown RBP eCLIP7.11□□□□□ -1.27
SCARNA20.3-201ENST00000516913 PMM1Q92871 262 aa7.11□□□□□ -1.27
SCARNA20.3-201ENST00000516913 MAELQ96JY0 434 aaKnown RBP7.11□□□□□ -1.27
SCARNA20.3-201ENST00000516913 TSPAN32Q96QS1 320 aa7.11□□□□□ -1.27
SCARNA20.3-201ENST00000516913 PIMREGQ9BSJ6 248 aa7.11□□□□□ -1.27
SCARNA20.3-201ENST00000516913 LINC00470Q9BZP3 86 aa7.11□□□□□ -1.27
SCARNA20.3-201ENST00000516913 TPT1P8Q9HAU6 139 aa7.11□□□□□ -1.27
SCARNA20.3-201ENST00000516913 CRLF2Q9HC73 371 aa7.11□□□□□ -1.27
SCARNA20.3-201ENST00000516913 LPAR3Q9UBY5 353 aa7.11□□□□□ -1.27
SCARNA20.3-201ENST00000516913 PCDHB14Q9Y5E9 798 aa7.11□□□□□ -1.27
SCARNA20.3-201ENST00000516913 TRBV5-3A0A0A0MS03 114 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 ZNF587BE7ETH6 402 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 AGR2O95994 175 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 CLPTM1O96005 669 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 BGLAPP02818 100 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 CSF3P09919 207 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 BMP2P12643 396 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 H2AFXP16104 143 aaPredicted RBP7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 NPR2P20594 1047 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 NR4A1P22736 598 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 FKBP2P26885 142 aaKnown RBP7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 ALDH3B1P43353 468 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 ERVS71-1P61550 626 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 SNRPD2P62316 118 aaKnown RBP7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 TGFBR3Q03167 851 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 PIGFQ07326 219 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 STX3Q13277 289 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 FXNQ16595 210 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 KRT71Q3SY84 523 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 IQCCQ4KMZ1 466 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 PAGE3Q5JUK9 113 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 PRAMEF8Q5VWM4 474 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 PRAMEF7Q5VXH5 474 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 CARD17Q5XLA6 110 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 TMEM225Q6GV28 225 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 LRFN4Q6PJG9 635 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 KLHL24Q6TFL4 600 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 C6orf89Q6UWU4 347 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 RBM45Q8IUH3 476 aaKnown RBP7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 C20orf196Q8IYI0 205 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 LRRC34Q8IZ02 419 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 DEPDC4Q8N2C3 294 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 MREGQ8N565 214 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 CLDND2Q8NHS1 167 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 STK35Q8TDR2 534 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 ARL8AQ96BM9 186 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 SLC41A3Q96GZ6 507 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 SPATA9Q9BWV2 254 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 PIF1Q9H611 641 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 NARFLQ9H6Q4 476 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 ZNF442Q9H7R0 627 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 LPAR2Q9HBW0 351 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 BCL2L10Q9HD36 194 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 ESM1Q9NQ30 184 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 ZNF446Q9NWS9 450 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 MED29Q9NX70 200 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 TREM2Q9NZC2 230 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 KLHL14Q9P2G3 628 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 TMEFF2Q9UIK5 374 aaPredicted RBP7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 CACNG2Q9Y698 323 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 WNK1Q9H4A3 2382 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 DYSFO75923 2080 aa7.1□□□□□ -1.27
SCARNA20.3-201ENST00000516913 LOC102725191A0A1B0GVB3 256 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 OR6C65A6NJZ3 312 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 M0R3G1 203 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 RFXANKO14593 260 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 PDE5AO76074 875 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 WNT11O96014 354 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 CRYAAP02489 173 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 ZCCHC18P0CG32 403 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 KITP10721 976 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 CCL2P13500 99 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 APEX1P27695 318 aaKnown RBP7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 CRATP43155 626 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 MAP2K6P52564 334 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 CRYBA2P53672 197 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 CLNS1AP54105 237 aaKnown RBP7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 DSTNP60981 165 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 RUNX1T1Q06455 604 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 NPRL3Q12980 569 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 SNTB2Q13425 540 aaKnown RBP7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 SELPLGQ14242 412 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 RGNQ15493 299 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 NPTX1Q15818 432 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 C3orf36Q3SXR2 165 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 PDCD4Q53EL6 469 aaKnown RBP7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 RINLQ6ZS11 566 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 ZNF627Q7L945 461 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 MEX3DQ86XN8 651 aaKnown RBP7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 SKA3Q8IX90 412 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 LINC01356Q8N9X3 169 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 UBASH3BQ8TF42 649 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 CKAP2Q8WWK9 683 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 OXGR1Q96P68 337 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 SYT3Q9BQG1 590 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 C1QTNF5Q9BXJ0 243 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms