RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	GUSBP1	Q15486	140 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	KRTAP21-3	Q3LHN1	58 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	FBXW9	Q5XUX1	488 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	HMBOX1	Q6NT76	420 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	ZNF730	Q6ZMV8	503 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340		Q6ZT83	130 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	CCDC121	Q6ZUS5	278 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	OFCC1	Q8IZS5	231 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	GPR137C	Q8N3F9	429 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	LINC00471	Q8N535	108 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	RNF148	Q8N7C7	305 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	TMEM99	Q8N816	258 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	OR9K2	Q8NGE7	335 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	OR5J2	Q8NH18	312 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	TMEM239	Q8WW34	195 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	HSD17B8	Q92506	261 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	TMEM45B	Q96B21	275 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	ASB9	Q96DX5	294 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	KTI12	Q96EK9	354 aa	Predicted RBP	6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	SGTB	Q96EQ0	304 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	C14orf79	Q96F83	325 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	PYURF	Q96I23	114 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	ADAD1	Q96M93	576 aa	Known RBP	6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	BTBD10	Q9BSF8	475 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	THTPA	Q9BU02	230 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	MRPL39	Q9NYK5	338 aa	Known RBP	6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	CD300A	Q9UGN4	299 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	ZNF229	Q9UJW7	825 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	RCE1	Q9Y256	329 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	MAGED1	Q9Y5V3	778 aa	Predicted RBP	6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340	ENPP4	Q9Y6X5	453 aa		6.64	□□□□□ -1.35
NR1I3-231	ENST00000512340		A6NHS1	94 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	KDM4E	B2RXH2	506 aa	Predicted RBP	6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	MCIDAS	D6RGH6	385 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340		M0R082	166 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	RNF13	O43567	381 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	MGRN1	O60291	552 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	TPST2	O60704	377 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	CIB2	O75838	187 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	DNAJC8	O75937	253 aa	Predicted RBP	6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	KRT36	O76013	467 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	UBOX5	O94941	541 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	CH25H	O95992	272 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	CGA	P01215	116 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	FABP3	P05413	133 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	H1F0	P07305	194 aa	Known RBP	6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	ADORA3	P0DMS8	318 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	SAG	P10523	405 aa	Predicted RBP	6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	NCK1	P16333	377 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	GRN	P28799	593 aa	Known RBP	6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	GRPR	P30550	384 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	RRM2	P31350	389 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	UGT2B10	P36537	528 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	GUCA1A	P43080	201 aa	Predicted RBP	6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	DAP3	P51398	398 aa	Known RBP	6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	NR1H2	P55055	460 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	TFF3	Q07654	80 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	PIN1	Q13526	163 aa	Predicted RBP	6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	GK3P	Q14409	553 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	FGD3	Q5JSP0	725 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	SFRP5	Q5T4F7	317 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	KLHL17	Q6TDP4	642 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	PLXDC2	Q6UX71	529 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	TFAP2E	Q6VUC0	442 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	LINC00114	Q6XXX2	140 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	BHLHA15	Q7RTS1	189 aa	Predicted RBP	6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	PXK	Q7Z7A4	578 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	VTCN1	Q7Z7D3	282 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	TMEM200A	Q86VY9	491 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	CCDC103	Q8IW40	242 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	LILRB2	Q8N423	598 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	LINC00469	Q8N7U9	141 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	ZNF417	Q8TAU3	575 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	FNDC8	Q8TC99	324 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	ACOT11	Q8WXI4	607 aa	Predicted RBP	6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	TAAR8	Q969N4	342 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	DNAJA3	Q96EY1	480 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	ZNF300	Q96RE9	604 aa	Predicted RBP	6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	NR1H4	Q96RI1	486 aa	Predicted RBP	6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	ZNF587	Q96SQ5	575 aa	Predicted RBP	6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	PIP5K1A	Q99755	562 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	PRR14	Q9BWN1	585 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	SLCO5A1	Q9H2Y9	848 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	MAGIX	Q9H6Y5	334 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	FKBP14	Q9NWM8	211 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	TAS2R16	Q9NYV7	291 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	TAS2R1	Q9NYW7	299 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	USP22	Q9UPT9	525 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	AURKC	Q9UQB9	309 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	TMA7	Q9Y2S6	64 aa	Known RBP	6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	FLVCR1	Q9Y5Y0	555 aa		6.63	□□□□□ -1.35
NR1I3-231	ENST00000512340	ABCA4	P78363	2273 aa		6.62	□□□□□ -1.35
NR1I3-231	ENST00000512340	OTOG	Q6ZRI0	2925 aa		6.62	□□□□□ -1.35
NR1I3-231	ENST00000512340		A0A0B4J203	849 aa		6.62	□□□□□ -1.35
NR1I3-231	ENST00000512340		A0A1W2PRQ8	180 aa		6.62	□□□□□ -1.35
NR1I3-231	ENST00000512340	ZNF716	A6NP11	495 aa		6.62	□□□□□ -1.35
NR1I3-231	ENST00000512340	FTCDNL1	E5RQL4	147 aa		6.62	□□□□□ -1.35
NR1I3-231	ENST00000512340	KPNA4	O00629	521 aa	Predicted RBP	6.62	□□□□□ -1.35
NR1I3-231	ENST00000512340	GNGT2	O14610	69 aa		6.62	□□□□□ -1.35
NR1I3-231	ENST00000512340	OR7A10	O76100	309 aa		6.62	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms