RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 ADORA3P0DMS8 318 aa14.9□□□□□ -0.02
CLDND1-219ENST00000508659 CDH2P19022 906 aaPredicted RBP14.9□□□□□ -0.02
CLDND1-219ENST00000508659 AHCYP23526 432 aa14.9□□□□□ -0.02
CLDND1-219ENST00000508659 FOXG1P55316 489 aaPredicted RBP14.9□□□□□ -0.02
CLDND1-219ENST00000508659 LTBQ06643 244 aa14.9□□□□□ -0.02
CLDND1-219ENST00000508659 BSPH1Q075Z2 132 aa14.9□□□□□ -0.02
CLDND1-219ENST00000508659 LGALS3BPQ08380 585 aa14.9□□□□□ -0.02
CLDND1-219ENST00000508659 NCMAPQ5T1S8 102 aa14.9□□□□□ -0.02
CLDND1-219ENST00000508659 HMBOX1Q6NT76 420 aa14.9□□□□□ -0.02
CLDND1-219ENST00000508659 C16orf89Q6UX73 402 aa14.9□□□□□ -0.02
CLDND1-219ENST00000508659 SEZ6L2Q6UXD5 910 aa14.9□□□□□ -0.02
CLDND1-219ENST00000508659 C20orf204Q6ZNR8 217 aa14.9□□□□□ -0.02
CLDND1-219ENST00000508659 FKBP9P1Q75LS8 142 aa14.9□□□□□ -0.02
CLDND1-219ENST00000508659 NANOGNBQ7Z5D8 188 aa14.9□□□□□ -0.02
CLDND1-219ENST00000508659 RNF148Q8N7C7 305 aa14.9□□□□□ -0.02
CLDND1-219ENST00000508659 CCDC197Q8NCU1 140 aa14.9□□□□□ -0.02
CLDND1-219ENST00000508659 PIK3C3Q8NEB9 887 aa14.9□□□□□ -0.02
CLDND1-219ENST00000508659 TMEM255BQ8WV15 326 aa14.9□□□□□ -0.02
CLDND1-219ENST00000508659 CCL19Q99731 98 aa14.9□□□□□ -0.02
CLDND1-219ENST00000508659 AMBRA1Q9C0C7 1298 aa14.9□□□□□ -0.02
CLDND1-219ENST00000508659 EGFL7Q9UHF1 273 aa14.9□□□□□ -0.02
CLDND1-219ENST00000508659 RPS6KA6Q9UK32 745 aa14.9□□□□□ -0.02
CLDND1-219ENST00000508659 AMDHD2Q9Y303 409 aa14.9□□□□□ -0.02
CLDND1-219ENST00000508659 NOX1Q9Y5S8 564 aa14.9□□□□□ -0.02
CLDND1-219ENST00000508659 A0A1W2PR80 420 aa14.89□□□□□ -0.03
CLDND1-219ENST00000508659 PLPP3O14495 311 aa14.89□□□□□ -0.03
CLDND1-219ENST00000508659 MT-ND1P03886 318 aa14.89□□□□□ -0.03
CLDND1-219ENST00000508659 TCN1P20061 433 aaPredicted RBP14.89□□□□□ -0.03
CLDND1-219ENST00000508659 UGT2B15P54855 530 aa14.89□□□□□ -0.03
CLDND1-219ENST00000508659 ST3GAL3Q11203 375 aa14.89□□□□□ -0.03
CLDND1-219ENST00000508659 FOXD4Q12950 439 aaPredicted RBP14.89□□□□□ -0.03
CLDND1-219ENST00000508659 ACKR1Q16570 336 aa14.89□□□□□ -0.03
CLDND1-219ENST00000508659 DEFB113Q30KQ7 82 aa14.89□□□□□ -0.03
CLDND1-219ENST00000508659 SAMD4BQ5PRF9 694 aaKnown RBP14.89□□□□□ -0.03
CLDND1-219ENST00000508659 KLHL17Q6TDP4 642 aa14.89□□□□□ -0.03
CLDND1-219ENST00000508659 PXKQ7Z7A4 578 aa14.89□□□□□ -0.03
CLDND1-219ENST00000508659 NKAIN4Q8IVV8 208 aa14.89□□□□□ -0.03
CLDND1-219ENST00000508659 OFCC1Q8IZS5 231 aa14.89□□□□□ -0.03
CLDND1-219ENST00000508659 GPR137CQ8N3F9 429 aa14.89□□□□□ -0.03
CLDND1-219ENST00000508659 PFN4Q8NHR9 129 aa14.89□□□□□ -0.03
CLDND1-219ENST00000508659 TMEM239Q8WW34 195 aa14.89□□□□□ -0.03
CLDND1-219ENST00000508659 MBD6Q96DN6 1003 aa14.89□□□□□ -0.03
CLDND1-219ENST00000508659 MUS81Q96NY9 551 aa14.89□□□□□ -0.03
CLDND1-219ENST00000508659 ALPK1Q96QP1 1244 aa14.89□□□□□ -0.03
CLDND1-219ENST00000508659 FOXC2Q99958 501 aa14.89□□□□□ -0.03
CLDND1-219ENST00000508659 TMEM204Q9BSN7 226 aa14.89□□□□□ -0.03
CLDND1-219ENST00000508659 LINC00470Q9BZP3 86 aa14.89□□□□□ -0.03
CLDND1-219ENST00000508659 NPAP1Q9NZP6 1156 aa14.89□□□□□ -0.03
CLDND1-219ENST00000508659 MAGED1Q9Y5V3 778 aaPredicted RBP14.89□□□□□ -0.03
CLDND1-219ENST00000508659 SLC25A15Q9Y619 301 aa14.89□□□□□ -0.03
CLDND1-219ENST00000508659 CCDC168Q8NDH2 2452 aa14.89□□□□□ -0.03
CLDND1-219ENST00000508659 MPDZO75970 2070 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 C11orf98E9PRG8 122 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 MS4A18H0YCH9 400 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 RNF13O43567 381 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 UPK3AO75631 287 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 ZNF432O94892 652 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 HIST1H2ABP04908 130 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 HLA-DOBP13765 273 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 CD53P19397 219 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 MNAT1P51948 309 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 SH3BGRP55822 239 aaPredicted RBP14.88□□□□□ -0.03
CLDND1-219ENST00000508659 SLC25A3Q00325 362 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 ROR2Q01974 943 aaKnown RBP14.88□□□□□ -0.03
CLDND1-219ENST00000508659 MS4A18Q3C1V0 323 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 CARD17Q5XLA6 110 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 ADAM5Q6NVV9 412 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 TMEM108Q6UXF1 575 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 HIST3H2AQ7L7L0 130 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 SLC46A3Q7Z3Q1 461 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 TMEM123Q8N131 208 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 ANKK1Q8NFD2 765 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 HIST1H2ACQ93077 130 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 SGTBQ96EQ0 304 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 HS6ST2Q96MM7 605 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 OR2M2Q96R28 347 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 FNDC11Q9BVV2 318 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 MEPEQ9NQ76 525 aaPredicted RBP14.88□□□□□ -0.03
CLDND1-219ENST00000508659 SLC17A5Q9NRA2 495 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 MED29Q9NX70 200 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 MAGEL2Q9UJ55 1249 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 A4GNTQ9UNA3 340 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 SAMD4AQ9UPU9 718 aaKnown RBP14.88□□□□□ -0.03
CLDND1-219ENST00000508659 MED31Q9Y3C7 131 aa14.88□□□□□ -0.03
CLDND1-219ENST00000508659 HS3ST1O14792 307 aa14.87□□□□□ -0.03
CLDND1-219ENST00000508659 WNT11O96014 354 aa14.87□□□□□ -0.03
CLDND1-219ENST00000508659 PLAUP00749 431 aa14.87□□□□□ -0.03
CLDND1-219ENST00000508659 IGF2P01344 180 aa14.87□□□□□ -0.03
CLDND1-219ENST00000508659 ASAH2BP0C7U1 165 aa14.87□□□□□ -0.03
CLDND1-219ENST00000508659 YAP1P46937 504 aaKnown RBP14.87□□□□□ -0.03
CLDND1-219ENST00000508659 ZNF83P51522 516 aa14.87□□□□□ -0.03
CLDND1-219ENST00000508659 KRT72Q14CN4 511 aa14.87□□□□□ -0.03
CLDND1-219ENST00000508659 TESK1Q15569 626 aa14.87□□□□□ -0.03
CLDND1-219ENST00000508659 HIKESHIQ53FT3 197 aa14.87□□□□□ -0.03
CLDND1-219ENST00000508659 GLYATQ6IB77 296 aa14.87□□□□□ -0.03
CLDND1-219ENST00000508659 LINGO2Q7L985 606 aa14.87□□□□□ -0.03
CLDND1-219ENST00000508659 CYP4Z1Q86W10 505 aa14.87□□□□□ -0.03
CLDND1-219ENST00000508659 LURAP1LQ8IV03 231 aa14.87□□□□□ -0.03
CLDND1-219ENST00000508659 DEFB107AQ8IZN7 70 aa14.87□□□□□ -0.03
CLDND1-219ENST00000508659 FITM2Q8N6M3 262 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms