RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 NPDC1Q9NQX5 325 aaPredicted RBP8.11□□□□□ -1.11
NUP54-207ENST00000508583 ASB6Q9NWX5 421 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 ZNF226Q9NYT6 803 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 ING1Q9UK53 422 aaPredicted RBP8.11□□□□□ -1.11
NUP54-207ENST00000508583 ANKHD1Q8IWZ3 2542 aaKnown RBP8.1□□□□□ -1.11
NUP54-207ENST00000508583 PKDREJQ9NTG1 2253 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 ADGRG4Q8IZF6 3080 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 A0A1W2PRG6 482 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 DHRS12A0PJE2 317 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 ZNF726A6NNF4 738 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 EFCAB9A8MZ26 197 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 ZNF814B7Z6K7 855 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 ZNF587BE7ETH6 402 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 J3KTA2 159 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 PLPP3O14495 311 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 ACOT8O14734 319 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 FFAR1O14842 300 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 CASKO14936 926 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 ENTPD5O75356 428 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 SLC43A1O75387 559 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 SEMG1P04279 462 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 IFI30P13284 250 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 PAX7P23759 505 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 COL8A1P27658 744 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 SSTR2P30874 369 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 MAGEA2P43356 314 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 DAP3P51398 398 aaKnown RBP8.1□□□□□ -1.11
NUP54-207ENST00000508583 P2RY4P51582 365 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 UGT2B15P54855 530 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 SH3BGRP55822 239 aaPredicted RBP8.1□□□□□ -1.11
NUP54-207ENST00000508583 PRPS1P60891 318 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 VLDLRP98155 873 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 POU3F1Q03052 451 aaPredicted RBP8.1□□□□□ -1.11
NUP54-207ENST00000508583 PRKCDQ05655 676 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 ZP4Q12836 540 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 ITGADQ13349 1161 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 OR7E24Q6IFN5 339 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 ZNF474Q6S9Z5 364 aaPredicted RBP8.1□□□□□ -1.11
NUP54-207ENST00000508583 NUFIP2Q7Z417 695 aaKnown RBP8.1□□□□□ -1.11
NUP54-207ENST00000508583 TSPYL5Q86VY4 417 aaPredicted RBP8.1□□□□□ -1.11
NUP54-207ENST00000508583 P2RY8Q86VZ1 359 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 SPATA24Q86W54 205 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 NRMQ8IXM6 262 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 C10orf67Q8IYJ2 551 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 FAM86B1Q8N7N1 296 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 SLC7A13Q8TCU3 470 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 C14orf79Q96F83 325 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 RSRC1Q96IZ7 334 aaKnown RBP8.1□□□□□ -1.11
NUP54-207ENST00000508583 SEPHS2Q99611 448 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 MED18Q9BUE0 208 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 CADM1Q9BY67 442 aaKnown RBP8.1□□□□□ -1.11
NUP54-207ENST00000508583 MCCC2Q9HCC0 563 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 MOV10Q9HCE1 1003 aaKnown RBP8.1□□□□□ -1.11
NUP54-207ENST00000508583 NGBQ9NPG2 151 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 MEPEQ9NQ76 525 aaPredicted RBP8.1□□□□□ -1.11
NUP54-207ENST00000508583 MAN2C1Q9NTJ4 1040 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 TAS2R16Q9NYV7 291 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 RHCGQ9UBD6 479 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 MALT1Q9UDY8 824 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 AURKCQ9UQB9 309 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 POMPQ9Y244 141 aa8.1□□□□□ -1.11
NUP54-207ENST00000508583 A0A087WUU8 490 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 TCRBV5S2A0A599 114 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 SH3D21A4FU49 640 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 NPIPB13A6NJU9 1138 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 CENPBD1B2RD01 187 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 NPIPB4C9JG80 1138 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 MCIDASD6RGH6 385 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 BLOC1S5-TXNDC5H3BN57 136 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 RAMP1O60894 148 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 ADAP00813 363 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 EPXP11678 715 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 FUT1P19526 365 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 KLK2P20151 261 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 CBLP22681 906 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 GRNP28799 593 aaKnown RBP8.09□□□□□ -1.11
NUP54-207ENST00000508583 MPGP29372 298 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 RRM2P31350 389 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 CLDN17P56750 224 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 MS4A2Q01362 244 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 FOXD4Q12950 439 aaPredicted RBP8.09□□□□□ -1.11
NUP54-207ENST00000508583 SFRP5Q5T4F7 317 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 C1orf146Q5VVC0 180 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 FAM205BPQ63HN1 556 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 HMBOX1Q6NT76 420 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 NIPAL3Q6P499 406 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 PODNL1Q6PEZ8 512 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 TMPRSS11FQ6ZWK6 438 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 SLC46A3Q7Z3Q1 461 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 OAFQ86UD1 273 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 GABRG1Q8N1C3 465 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 GPR137CQ8N3F9 429 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 C1orf162Q8NEQ5 155 aaPredicted RBP8.09□□□□□ -1.11
NUP54-207ENST00000508583 PFN4Q8NHR9 129 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 HSD17B8Q92506 261 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 ZNF775Q96BV0 537 aaPredicted RBP8.09□□□□□ -1.11
NUP54-207ENST00000508583 LRR1Q96L50 414 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 ZNF385AQ96PM9 386 aaKnown RBP8.09□□□□□ -1.11
NUP54-207ENST00000508583 RAB3IPQ96QF0 476 aaPredicted RBP8.09□□□□□ -1.11
NUP54-207ENST00000508583 LINC00470Q9BZP3 86 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms