RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 OR51D1Q8NGF3 324 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 WFDC5Q8TCV5 224 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 ASB11Q8WXH4 323 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 DCUN1D4Q92564 292 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 SCARF2Q96GP6 870 aaPredicted RBP6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 UBQLN3Q9H347 655 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 PDFQ9HBH1 243 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 SMCO4Q9NRQ5 59 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 ASB6Q9NWX5 421 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 GFOD1Q9NXC2 390 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 GSKIPQ9P0R6 139 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 OR5V1Q9UGF6 321 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 FREM2Q5SZK8 3169 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 FITM1A5D6W6 292 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 TMEM235A6NFC5 223 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 RFPL4AA6NLU0 287 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 RFPL4AL1F8VTS6 287 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 LRP3O75074 770 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 STX11O75558 287 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 RBBP9O75884 186 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 CD160O95971 181 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 MT-ND5P03915 603 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 KLKB1P03952 638 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 NPSP0C0P6 89 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 OR4E1P0C645 316 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 OR8U9P0C7N5 309 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 SRMP19623 302 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 RAB5AP20339 215 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 CASRP41180 1078 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 TAS2R20P59543 309 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 TSPAN31Q12999 210 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 CRMP1Q14194 572 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 CLEC12BQ2HXU8 276 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 CCDC116Q8IYX3 515 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 ZNF561Q8N587 486 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 INO80EQ8NBZ0 244 aaPredicted RBP6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 OR6K6Q8NGW6 343 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 OR10AC1Q8NH08 325 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 OR8U1Q8NH10 309 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 OR4K13Q8NH42 304 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 MITD1Q8WV92 249 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 RRNAD1Q96FB5 475 aaKnown RBP6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 S100A16Q96FQ6 103 aaKnown RBP6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 TMEM41AQ96HV5 264 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 PGLYRP3Q96LB9 341 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 CCDC74BQ96LY2 380 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 SPACA1Q9HBV2 294 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 CSNK1G1Q9HCP0 422 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 ZCCHC3Q9NUD5 404 aaKnown RBP6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 RCC2Q9P258 522 aaKnown RBP6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 HCSTQ9UBK5 93 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 NDOR1Q9UHB4 597 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 RCL1Q9Y2P8 373 aaKnown RBP6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 RFNGQ9Y644 331 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 RNF215Q9Y6U7 377 aa6.66□□□□□ -1.34
LIMCH1-207ENST00000508466 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 CENPVL1A0A0U1RR11 272 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 A0A1B0GW55 424 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 TMEM82A0PJX8 343 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 FOXE1O00358 373 aaPredicted RBP6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 DPM1O60762 260 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 NFATC1O95644 943 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 HLA-AP01891 365 aaKnown RBP6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 F11P03951 625 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 RPN2P04844 631 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 ZGLP1P0C6A0 271 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 DUX4L2P0CJ85 424 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 DUX4L3P0CJ86 424 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 DUX4L4P0CJ87 422 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 DUX4L5P0CJ88 424 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 DUX4L6P0CJ89 424 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 DUX4L7P0CJ90 424 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 SAGP10523 405 aaPredicted RBP6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 HOXB6P17509 224 aaKnown RBP6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 UQCRC2P22695 453 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 LPAR6P43657 344 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 GSK3AP49840 483 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 RBP2P50120 134 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 FXYD6P3P58550 94 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 DHODHQ02127 395 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 TLE1Q04724 770 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 HGFACQ04756 655 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 ZNF177Q13360 481 aaPredicted RBP6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 EBPQ15125 230 aaKnown RBP6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 ZNF674Q2M3X9 581 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 C1orf94Q6P1W5 598 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 ZNF585AQ6P3V2 769 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 ZNF627Q7L945 461 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 RTN4RL2Q86UN3 420 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 ARMC10Q8N2F6 343 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 KCNRGQ8N5I3 272 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 CAMKVQ8NCB2 501 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 OR1J4Q8NGS1 313 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 OR13C2Q8NGS9 318 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 OR2G2Q8NGZ5 317 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 SUSD6Q92537 303 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 RFKQ969G6 155 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 ARL11Q969Q4 196 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 PPP1R14AQ96A00 147 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 INTS14Q96SY0 518 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms