RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 NRF1Q16656 503 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 DUSP7Q16829 419 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 FAM69AQ5T7M9 428 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 HMBOX1Q6NT76 420 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 ANKRD16Q6P6B7 361 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 ULK3Q6PHR2 472 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 NHLRC1Q6VVB1 395 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 H1FNTQ75WM6 255 aaPredicted RBP14.15□□□□□ -0.14
SCLT1-204ENST00000503215 ABHD12BQ7Z5M8 362 aaPredicted RBP14.15□□□□□ -0.14
SCLT1-204ENST00000503215 HIPK4Q8NE63 616 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 GPR32P1Q8NGA4 272 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 DNAJA4Q8WW22 397 aaPredicted RBP14.15□□□□□ -0.14
SCLT1-204ENST00000503215 FBXO17Q96EF6 278 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 MAGEB18Q96M61 343 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 SLC38A2Q96QD8 506 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 OR2M2Q96R28 347 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 MYCBPQ99417 103 aaPredicted RBP14.15□□□□□ -0.14
SCLT1-204ENST00000503215 RHNO1Q9BSD3 238 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 SPATA5L1Q9BVQ7 753 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 LINC00470Q9BZP3 86 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 GPR35Q9HC97 309 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 NPHS2Q9NP85 383 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 HMGB1P1B2RPK0 211 aaPredicted RBP14.14□□□□□ -0.15
SCLT1-204ENST00000503215 H7C417 338 aa14.14□□□□□ -0.15
SCLT1-204ENST00000503215 AIM2O14862 343 aa14.14□□□□□ -0.15
SCLT1-204ENST00000503215 SEC14L2O76054 403 aa14.14□□□□□ -0.15
SCLT1-204ENST00000503215 BGLAPP02818 100 aa14.14□□□□□ -0.15
SCLT1-204ENST00000503215 OPN1SWP03999 348 aa14.14□□□□□ -0.15
SCLT1-204ENST00000503215 CECR9P0C854 216 aa14.14□□□□□ -0.15
SCLT1-204ENST00000503215 CALCRP30988 508 aa14.14□□□□□ -0.15
SCLT1-204ENST00000503215 PCBP3P57721 371 aaKnown RBP14.14□□□□□ -0.15
SCLT1-204ENST00000503215 UBE2NP61088 152 aaKnown RBP14.14□□□□□ -0.15
SCLT1-204ENST00000503215 IL1RL1Q01638 556 aa14.14□□□□□ -0.15
SCLT1-204ENST00000503215 NPTX1Q15818 432 aa14.14□□□□□ -0.15
SCLT1-204ENST00000503215 SWI5Q1ZZU3 235 aa14.14□□□□□ -0.15
SCLT1-204ENST00000503215 CARD17Q5XLA6 110 aa14.14□□□□□ -0.15
SCLT1-204ENST00000503215 DHDDSQ86SQ9 333 aa14.14□□□□□ -0.15
SCLT1-204ENST00000503215 TSPYL5Q86VY4 417 aaPredicted RBP14.14□□□□□ -0.15
SCLT1-204ENST00000503215 RBM45Q8IUH3 476 aaKnown RBP14.14□□□□□ -0.15
SCLT1-204ENST00000503215 ARMC8Q8IUR7 673 aa14.14□□□□□ -0.15
SCLT1-204ENST00000503215 TMEM123Q8N131 208 aa14.14□□□□□ -0.15
SCLT1-204ENST00000503215 OR4D11Q8NGI4 311 aa14.14□□□□□ -0.15
SCLT1-204ENST00000503215 SLC47A1Q96FL8 570 aa14.14□□□□□ -0.15
SCLT1-204ENST00000503215 TXNDC15Q96J42 360 aa14.14□□□□□ -0.15
SCLT1-204ENST00000503215 ANKRD27Q96NW4 1050 aa14.14□□□□□ -0.15
SCLT1-204ENST00000503215 CGREF1Q99674 301 aa14.14□□□□□ -0.15
SCLT1-204ENST00000503215 EMC6Q9BV81 110 aa14.14□□□□□ -0.15
SCLT1-204ENST00000503215 TMEM27Q9HBJ8 222 aa14.14□□□□□ -0.15
SCLT1-204ENST00000503215 OBP2BQ9NPH6 170 aa14.14□□□□□ -0.15
SCLT1-204ENST00000503215 YAE1D1Q9NRH1 226 aa14.14□□□□□ -0.15
SCLT1-204ENST00000503215 LEF1Q9UJU2 399 aaPredicted RBP14.14□□□□□ -0.15
SCLT1-204ENST00000503215 RCE1Q9Y256 329 aa14.14□□□□□ -0.15
SCLT1-204ENST00000503215 ARPC4-TTLL3A0A0A6YYG9 625 aa14.13□□□□□ -0.15
SCLT1-204ENST00000503215 M0QX08 132 aa14.13□□□□□ -0.15
SCLT1-204ENST00000503215 CD5LO43866 347 aa14.13□□□□□ -0.15
SCLT1-204ENST00000503215 OR2T1O43869 369 aa14.13□□□□□ -0.15
SCLT1-204ENST00000503215 SLC43A1O75387 559 aa14.13□□□□□ -0.15
SCLT1-204ENST00000503215 IGLV1-44P01699 117 aa14.13□□□□□ -0.15
SCLT1-204ENST00000503215 THY1P04216 161 aa14.13□□□□□ -0.15
SCLT1-204ENST00000503215 NAAAQ02083 359 aa14.13□□□□□ -0.15
SCLT1-204ENST00000503215 HGFACQ04756 655 aa14.13□□□□□ -0.15
SCLT1-204ENST00000503215 CEACAM16Q2WEN9 425 aa14.13□□□□□ -0.15
SCLT1-204ENST00000503215 FAM91A1Q658Y4 838 aa14.13□□□□□ -0.15
SCLT1-204ENST00000503215 WDR88Q6ZMY6 472 aa14.13□□□□□ -0.15
SCLT1-204ENST00000503215 DPP10Q8N608 796 aa14.13□□□□□ -0.15
SCLT1-204ENST00000503215 MAGEE2Q8TD90 523 aaPredicted RBP14.13□□□□□ -0.15
SCLT1-204ENST00000503215 SLC41A3Q96GZ6 507 aa14.13□□□□□ -0.15
SCLT1-204ENST00000503215 ZNF607Q96SK3 696 aa14.13□□□□□ -0.15
SCLT1-204ENST00000503215 CRLF2Q9HC73 371 aa14.13□□□□□ -0.15
SCLT1-204ENST00000503215 MED29Q9NX70 200 aa14.13□□□□□ -0.15
SCLT1-204ENST00000503215 CRNNQ9UBG3 495 aaPredicted RBP14.13□□□□□ -0.15
SCLT1-204ENST00000503215 TESQ9UGI8 421 aaKnown RBP14.13□□□□□ -0.15
SCLT1-204ENST00000503215 CORO2BQ9UQ03 480 aa14.13□□□□□ -0.15
SCLT1-204ENST00000503215 NDUFAF1Q9Y375 327 aa14.13□□□□□ -0.15
SCLT1-204ENST00000503215 FBN1P35555 2871 aaKnown RBP14.13□□□□□ -0.15
SCLT1-204ENST00000503215 ATRQ13535 2644 aa14.12□□□□□ -0.15
SCLT1-204ENST00000503215 CHD3Q12873 2000 aaKnown RBP14.12□□□□□ -0.15
SCLT1-204ENST00000503215 LOC102725191A0A1B0GVB3 256 aa14.12□□□□□ -0.15
SCLT1-204ENST00000503215 PRORSD1PA6NEY8 169 aa14.12□□□□□ -0.15
SCLT1-204ENST00000503215 OR6C65A6NJZ3 312 aa14.12□□□□□ -0.15
SCLT1-204ENST00000503215 RPL36A-HNRNPH2H7BZ11 118 aa14.12□□□□□ -0.15
SCLT1-204ENST00000503215 M0R3G1 203 aa14.12□□□□□ -0.15
SCLT1-204ENST00000503215 EDF1O60869 148 aaKnown RBP14.12□□□□□ -0.15
SCLT1-204ENST00000503215 SERPINB7O75635 380 aa14.12□□□□□ -0.15
SCLT1-204ENST00000503215 LYPD3O95274 346 aa14.12□□□□□ -0.15
SCLT1-204ENST00000503215 SF3A3Q12874 501 aaKnown RBP eCLIP14.12□□□□□ -0.15
SCLT1-204ENST00000503215 CYP51A1Q16850 503 aa14.12□□□□□ -0.15
SCLT1-204ENST00000503215 VHLLQ6RSH7 139 aa14.12□□□□□ -0.15
SCLT1-204ENST00000503215 CLEC2AQ6UVW9 174 aa14.12□□□□□ -0.15
SCLT1-204ENST00000503215 NET1Q7Z628 596 aaPredicted RBP14.12□□□□□ -0.15
SCLT1-204ENST00000503215 GPR137CQ8N3F9 429 aa14.12□□□□□ -0.15
SCLT1-204ENST00000503215 C11orf65Q8NCR3 313 aa14.12□□□□□ -0.15
SCLT1-204ENST00000503215 OR6T1Q8NGN1 323 aa14.12□□□□□ -0.15
SCLT1-204ENST00000503215 MCHR1Q99705 422 aa14.12□□□□□ -0.15
SCLT1-204ENST00000503215 ARHGDIGQ99819 225 aa14.12□□□□□ -0.15
SCLT1-204ENST00000503215 RABEP2Q9H5N1 569 aa14.12□□□□□ -0.15
SCLT1-204ENST00000503215 CA10Q9NS85 328 aa14.12□□□□□ -0.15
SCLT1-204ENST00000503215 SLC13A4Q9UKG4 626 aa14.12□□□□□ -0.15
SCLT1-204ENST00000503215 ANGPT4Q9Y264 503 aa14.12□□□□□ -0.15
SCLT1-204ENST00000503215 A0A0G2JND7 137 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms