RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 IL2RAP01589 272 aa12.09□□□□□ -0.47
CPNE1-227ENST00000498056 HOXD4P09016 255 aaPredicted RBP12.09□□□□□ -0.47
CPNE1-227ENST00000498056 TMIGD3P0DMS9 266 aaPredicted RBP12.09□□□□□ -0.47
CPNE1-227ENST00000498056 ZNF43P17038 809 aa12.09□□□□□ -0.47
CPNE1-227ENST00000498056 DAPP51397 102 aa12.09□□□□□ -0.47
CPNE1-227ENST00000498056 PRPS1P60891 318 aa12.09□□□□□ -0.47
CPNE1-227ENST00000498056 H3F3AP84243 136 aa12.09□□□□□ -0.47
CPNE1-227ENST00000498056 MELKQ14680 651 aa12.09□□□□□ -0.47
CPNE1-227ENST00000498056 EIF2S3LQ2VIR3 472 aaKnown RBP12.09□□□□□ -0.47
CPNE1-227ENST00000498056 OR2A2Q6IF42 318 aa12.09□□□□□ -0.47
CPNE1-227ENST00000498056 RPL13AP3Q6NVV1 102 aa12.09□□□□□ -0.47
CPNE1-227ENST00000498056 SMARCD3Q6STE5 483 aa12.09□□□□□ -0.47
CPNE1-227ENST00000498056 CASP12Q6UXS9 341 aa12.09□□□□□ -0.47
CPNE1-227ENST00000498056 SEM1Q6ZVN7 128 aa12.09□□□□□ -0.47
CPNE1-227ENST00000498056 FJX1Q86VR8 437 aa12.09□□□□□ -0.47
CPNE1-227ENST00000498056 CNEP1R1Q8N9A8 125 aa12.09□□□□□ -0.47
CPNE1-227ENST00000498056 OR9K2Q8NGE7 335 aa12.09□□□□□ -0.47
CPNE1-227ENST00000498056 MAGEE2Q8TD90 523 aaPredicted RBP12.09□□□□□ -0.47
CPNE1-227ENST00000498056 INTS12Q96CB8 462 aaKnown RBP12.09□□□□□ -0.47
CPNE1-227ENST00000498056 OXGR1Q96P68 337 aa12.09□□□□□ -0.47
CPNE1-227ENST00000498056 TNFRSF13CQ96RJ3 184 aa12.09□□□□□ -0.47
CPNE1-227ENST00000498056 TTYH2Q9BSA4 534 aa12.09□□□□□ -0.47
CPNE1-227ENST00000498056 INIPQ9NRY2 104 aa12.09□□□□□ -0.47
CPNE1-227ENST00000498056 B3GAT1Q9P2W7 334 aa12.09□□□□□ -0.47
CPNE1-227ENST00000498056 MEMO1Q9Y316 297 aa12.09□□□□□ -0.47
CPNE1-227ENST00000498056 ORC6Q9Y5N6 252 aa12.09□□□□□ -0.47
CPNE1-227ENST00000498056 ZNF462Q96JM2 2506 aa12.09□□□□□ -0.47
CPNE1-227ENST00000498056 A0A1W2PRG6 482 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 ZNF716A6NP11 495 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 E9PLN8 166 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 AKAP8O43823 692 aaKnown RBP12.08□□□□□ -0.48
CPNE1-227ENST00000498056 MITFO75030 526 aaPredicted RBP12.08□□□□□ -0.48
CPNE1-227ENST00000498056 VAMP5O95183 116 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 RCBTB2O95199 551 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 PPP1R3DO95685 299 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 STSP08842 583 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 GLI4P10075 376 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 HLA-DOBP13765 273 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 POU1F1P28069 291 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 AGTR1P30556 359 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 SLC6A6P31641 620 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 ALDH3A2P51648 485 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 FXYD6P3P58550 94 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 PPP2R2BQ00005 443 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 PMPCAQ10713 525 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 RIPK1Q13546 671 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 SLC17A1Q14916 467 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 ANKDD1AQ495B1 522 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 SLC36A3Q495N2 470 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 CLEC12AQ5QGZ9 265 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 TMEM201Q5SNT2 666 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 GTF2IRD2BQ6EKJ0 949 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 THSD4Q6ZMP0 1018 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 ZBTB49Q6ZSB9 765 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 RASSF6Q6ZTQ3 369 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.08□□□□□ -0.48
CPNE1-227ENST00000498056 GTF2IRD2Q86UP8 949 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 KIF18BQ86Y91 864 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 MARVELD2Q8N4S9 558 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 ANKK1Q8NFD2 765 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 OR8D4Q8NGM9 314 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 ZNF775Q96BV0 537 aaPredicted RBP12.08□□□□□ -0.48
CPNE1-227ENST00000498056 GMPPAQ96IJ6 420 aaPredicted RBP12.08□□□□□ -0.48
CPNE1-227ENST00000498056 SAMD8Q96LT4 415 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 VKORC1Q9BQB6 163 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 KATNB1Q9BVA0 655 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 IFT27Q9BW83 186 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 OSBPL10Q9BXB5 764 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 PLA2G12AQ9BZM1 189 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 RIBC2Q9H4K1 309 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 C12orf49Q9H741 205 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 MED29Q9NX70 200 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 TAS2R5Q9NYW4 299 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 EMC9Q9Y3B6 208 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 NOX1Q9Y5S8 564 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 FLVCR1Q9Y5Y0 555 aa12.08□□□□□ -0.48
CPNE1-227ENST00000498056 MS4A18H0YCH9 400 aa12.07□□□□□ -0.48
CPNE1-227ENST00000498056 CASQ2O14958 399 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-227ENST00000498056 TRAF3IP2O43734 574 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-227ENST00000498056 SS18L1O75177 396 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-227ENST00000498056 TOXO94900 526 aa12.07□□□□□ -0.48
CPNE1-227ENST00000498056 ALPLP05186 524 aa12.07□□□□□ -0.48
CPNE1-227ENST00000498056 IGFBP1P08833 259 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-227ENST00000498056 ZNF26P17031 533 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-227ENST00000498056 CDH2P19022 906 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-227ENST00000498056 TIMP3P35625 211 aa12.07□□□□□ -0.48
CPNE1-227ENST00000498056 DAP3P51398 398 aaKnown RBP12.07□□□□□ -0.48
CPNE1-227ENST00000498056 SLC16A1P53985 500 aa12.07□□□□□ -0.48
CPNE1-227ENST00000498056 CLDN17P56750 224 aa12.07□□□□□ -0.48
CPNE1-227ENST00000498056 CTXN1P60606 82 aa12.07□□□□□ -0.48
CPNE1-227ENST00000498056 FHL1Q13642 323 aa12.07□□□□□ -0.48
CPNE1-227ENST00000498056 POU4F3Q15319 338 aa12.07□□□□□ -0.48
CPNE1-227ENST00000498056 MS4A18Q3C1V0 323 aa12.07□□□□□ -0.48
CPNE1-227ENST00000498056 OGFRL1Q5TC84 451 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-227ENST00000498056 FBXW10Q5XX13 1052 aa12.07□□□□□ -0.48
CPNE1-227ENST00000498056 KDM4DQ6B0I6 523 aa12.07□□□□□ -0.48
CPNE1-227ENST00000498056 SLC35D2Q76EJ3 337 aa12.07□□□□□ -0.48
CPNE1-227ENST00000498056 PXKQ7Z7A4 578 aa12.07□□□□□ -0.48
CPNE1-227ENST00000498056 TUSC5Q8IXB3 177 aa12.07□□□□□ -0.48
CPNE1-227ENST00000498056 GALNT4Q8N4A0 578 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms