RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 H0YC42 278 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 ARHGEF9O43307 516 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 AKR7A3O95154 331 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 ANKRD34CP0C6C1 535 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 NPR2P20594 1047 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 IL11P20809 199 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 TAS2R43P59537 309 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 DMWDQ09019 674 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 BCL2A1Q16548 175 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 NTRK2Q16620 822 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.31□□□□□ -0.6
HMGN1-220ENST00000492280 C14orf28Q4W4Y0 310 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 HSD17B12Q53GQ0 312 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 ARHGAP40Q5TG30 622 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 WBP2NLQ6ICG8 309 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 FAM122BQ7Z309 247 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 OR6V1Q8N148 313 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 ZNF721Q8TF20 911 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 PPP1R14AQ96A00 147 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 OR2B2Q9GZK3 357 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 DUSP15Q9H1R2 295 aaPredicted RBP11.31□□□□□ -0.6
HMGN1-220ENST00000492280 URB1O60287 2271 aaKnown RBP11.31□□□□□ -0.6
HMGN1-220ENST00000492280 WNT11O96014 354 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 GIFP27352 417 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 ETFDHQ16134 617 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 TMPRSS9Q7Z410 1059 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 SIAH3Q8IW03 269 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 GALNT6Q8NCL4 622 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 PHF21AQ96BD5 680 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 ZNF285Q96NJ3 590 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 PHF7Q9BWX1 381 aaPredicted RBP11.31□□□□□ -0.6
HMGN1-220ENST00000492280 SYNDIG1Q9H7V2 258 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 RXFP3Q9NSD7 469 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 PRODH2Q9UF12 536 aa11.31□□□□□ -0.6
HMGN1-220ENST00000492280 SHISA8B8ZZ34 492 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 FBXO45P0C2W1 286 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 TMIGD3P0DMS9 266 aaPredicted RBP11.3□□□□□ -0.6
HMGN1-220ENST00000492280 GLULP15104 373 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 CFL1P23528 166 aaKnown RBP11.3□□□□□ -0.6
HMGN1-220ENST00000492280 IL12BP29460 328 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 RBMS1P29558 406 aaKnown RBP11.3□□□□□ -0.6
HMGN1-220ENST00000492280 PLCXD2Q0VAA5 305 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 MELKQ14680 651 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 EBPQ15125 230 aaKnown RBP11.3□□□□□ -0.6
HMGN1-220ENST00000492280 MEP1BQ16820 701 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 SLC36A2Q495M3 483 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 TMEM255AQ5JRV8 349 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 LIPNQ5VXI9 398 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 METAP1DQ6UB28 335 aaPredicted RBP11.3□□□□□ -0.6
HMGN1-220ENST00000492280 TIGD4Q8IY51 512 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 POMGNT2Q8NAT1 580 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 FAM71CQ8NEG0 241 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 ACOT12Q8WYK0 555 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 YIPF5Q969M3 257 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 ADIPOR1Q96A54 375 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 LCORQ96JN0 433 aaPredicted RBP11.3□□□□□ -0.6
HMGN1-220ENST00000492280 DPYSL5Q9BPU6 564 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 NMNAT2Q9BZQ4 307 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 MRM2Q9UI43 246 aaKnown RBP11.3□□□□□ -0.6
HMGN1-220ENST00000492280 KLHL21Q9UJP4 597 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 NOX1Q9Y5S8 564 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 CACNG2Q9Y698 323 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 PRRC2CQ9Y520 2896 aaKnown RBP11.3□□□□□ -0.6
HMGN1-220ENST00000492280 IGHV1OR21-1A0A087WYE8 117 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 A0A0A6YYJ9 748 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 LMO7DNF2Z398 122 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 OGG1O15527 345 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 ZNF354AO60765 605 aaPredicted RBP11.3□□□□□ -0.6
HMGN1-220ENST00000492280 SLC43A1O75387 559 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 CD14P08571 375 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 ACTA2P62736 377 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 ACTG2P63267 376 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 POU4F2Q12837 409 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 SQSTM1Q13501 440 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 FCN2Q15485 313 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 SMAD2Q15796 467 aaKnown RBP11.3□□□□□ -0.6
HMGN1-220ENST00000492280 FAM205BPQ63HN1 556 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 BICRALQ6AI39 1079 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 TSSK4Q6SA08 328 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 LINGO2Q7L985 606 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 MDGA2Q7Z553 956 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 CMTM4Q8IZR5 234 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 ZNF687Q8N1G0 1237 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 MS4A15Q8N5U1 240 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 ASCC1Q8N9N2 400 aaKnown RBP11.3□□□□□ -0.6
HMGN1-220ENST00000492280 GPR119Q8TDV5 335 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 THEM6Q8WUY1 208 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 PMM1Q92871 262 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 ADAD1Q96M93 576 aaKnown RBP11.3□□□□□ -0.6
HMGN1-220ENST00000492280 GAL3ST1Q99999 423 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 MOV10Q9HCE1 1003 aaKnown RBP11.3□□□□□ -0.6
HMGN1-220ENST00000492280 GRHPRQ9UBQ7 328 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 KCNG2Q9UJ96 466 aa11.3□□□□□ -0.6
HMGN1-220ENST00000492280 NOTOA8MTQ0 251 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 H0YIG0 161 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 H3BMH7 237 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 ZNF217O75362 1048 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 PPM1BO75688 479 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 PIAS2O75928 621 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 GLCEO94923 617 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms