RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 MDP1Q86V88 176 aa13.71□□□□□ -0.21
PLOD3-216ENST00000489927 GPR137CQ8N3F9 429 aa13.71□□□□□ -0.21
PLOD3-216ENST00000489927 UBASH3BQ8TF42 649 aa13.71□□□□□ -0.21
PLOD3-216ENST00000489927 CKAP2Q8WWK9 683 aa13.71□□□□□ -0.21
PLOD3-216ENST00000489927 VPS33AQ96AX1 596 aa13.71□□□□□ -0.21
PLOD3-216ENST00000489927 OXGR1Q96P68 337 aa13.71□□□□□ -0.21
PLOD3-216ENST00000489927 ARMC7Q9H6L4 198 aa13.71□□□□□ -0.21
PLOD3-216ENST00000489927 NOX3Q9HBY0 568 aa13.71□□□□□ -0.21
PLOD3-216ENST00000489927 PCDHB14Q9Y5E9 798 aa13.71□□□□□ -0.21
PLOD3-216ENST00000489927 M0R082 166 aa13.7□□□□□ -0.22
PLOD3-216ENST00000489927 FZD7O75084 574 aa13.7□□□□□ -0.22
PLOD3-216ENST00000489927 SLC22A3O75751 556 aa13.7□□□□□ -0.22
PLOD3-216ENST00000489927 ANP32DO95626 131 aa13.7□□□□□ -0.22
PLOD3-216ENST00000489927 ZCCHC18P0CG32 403 aa13.7□□□□□ -0.22
PLOD3-216ENST00000489927 CAPZA2P47755 286 aa13.7□□□□□ -0.22
PLOD3-216ENST00000489927 C1DQ13901 141 aaKnown RBP13.7□□□□□ -0.22
PLOD3-216ENST00000489927 CCNIQ14094 377 aa13.7□□□□□ -0.22
PLOD3-216ENST00000489927 TMEM123Q8N131 208 aa13.7□□□□□ -0.22
PLOD3-216ENST00000489927 PIK3C3Q8NEB9 887 aa13.7□□□□□ -0.22
PLOD3-216ENST00000489927 ZNF417Q8TAU3 575 aa13.7□□□□□ -0.22
PLOD3-216ENST00000489927 TAAR8Q969N4 342 aa13.7□□□□□ -0.22
PLOD3-216ENST00000489927 ZBTB9Q96C00 473 aa13.7□□□□□ -0.22
PLOD3-216ENST00000489927 OR2M2Q96R28 347 aa13.7□□□□□ -0.22
PLOD3-216ENST00000489927 ZNF587Q96SQ5 575 aaPredicted RBP13.7□□□□□ -0.22
PLOD3-216ENST00000489927 PAIP2Q9BPZ3 127 aaKnown RBP13.7□□□□□ -0.22
PLOD3-216ENST00000489927 TPK1Q9H3S4 243 aa13.7□□□□□ -0.22
PLOD3-216ENST00000489927 CACYBPQ9HB71 228 aaKnown RBP13.7□□□□□ -0.22
PLOD3-216ENST00000489927 KCNK9Q9NPC2 374 aa13.7□□□□□ -0.22
PLOD3-216ENST00000489927 IFT52Q9Y366 437 aa13.7□□□□□ -0.22
PLOD3-216ENST00000489927 ZNF99A8MXY4 864 aaPredicted RBP13.69□□□□□ -0.22
PLOD3-216ENST00000489927 AIM2O14862 343 aa13.69□□□□□ -0.22
PLOD3-216ENST00000489927 HDAC3O15379 428 aa13.69□□□□□ -0.22
PLOD3-216ENST00000489927 NUDT7P0C024 238 aa13.69□□□□□ -0.22
PLOD3-216ENST00000489927 IDO1P14902 403 aa13.69□□□□□ -0.22
PLOD3-216ENST00000489927 GRPRP30550 384 aa13.69□□□□□ -0.22
PLOD3-216ENST00000489927 IL1RL1Q01638 556 aa13.69□□□□□ -0.22
PLOD3-216ENST00000489927 PDCD4Q53EL6 469 aaKnown RBP13.69□□□□□ -0.22
PLOD3-216ENST00000489927 PHYHD1Q5SRE7 291 aa13.69□□□□□ -0.22
PLOD3-216ENST00000489927 C6orf89Q6UWU4 347 aa13.69□□□□□ -0.22
PLOD3-216ENST00000489927 RINLQ6ZS11 566 aa13.69□□□□□ -0.22
PLOD3-216ENST00000489927 MEX3DQ86XN8 651 aaKnown RBP13.69□□□□□ -0.22
PLOD3-216ENST00000489927 CCDC36Q8IYA8 594 aa13.69□□□□□ -0.22
PLOD3-216ENST00000489927 MREGQ8N565 214 aa13.69□□□□□ -0.22
PLOD3-216ENST00000489927 IL17RDQ8NFM7 739 aa13.69□□□□□ -0.22
PLOD3-216ENST00000489927 MAL2Q969L2 176 aa13.69□□□□□ -0.22
PLOD3-216ENST00000489927 CENPHQ9H3R5 247 aa13.69□□□□□ -0.22
PLOD3-216ENST00000489927 THUMPD1Q9NXG2 353 aaKnown RBP13.69□□□□□ -0.22
PLOD3-216ENST00000489927 USP22Q9UPT9 525 aa13.69□□□□□ -0.22
PLOD3-216ENST00000489927 TMEM247A6NEH6 219 aa13.68□□□□□ -0.22
PLOD3-216ENST00000489927 TRPC5OSA6NMA1 111 aa13.68□□□□□ -0.22
PLOD3-216ENST00000489927 M0R3G1 203 aa13.68□□□□□ -0.22
PLOD3-216ENST00000489927 TRAF3IP2O43734 574 aaPredicted RBP13.68□□□□□ -0.22
PLOD3-216ENST00000489927 OR2T1O43869 369 aa13.68□□□□□ -0.22
PLOD3-216ENST00000489927 HLA-HP01893 362 aa13.68□□□□□ -0.22
PLOD3-216ENST00000489927 KITP10721 976 aa13.68□□□□□ -0.22
PLOD3-216ENST00000489927 NR4A1P22736 598 aa13.68□□□□□ -0.22
PLOD3-216ENST00000489927 DVL1P1P54792 670 aaPredicted RBP13.68□□□□□ -0.22
PLOD3-216ENST00000489927 MSMPQ1L6U9 139 aa13.68□□□□□ -0.22
PLOD3-216ENST00000489927 C6orf10Q5SRN2 563 aa13.68□□□□□ -0.22
PLOD3-216ENST00000489927 FAM69AQ5T7M9 428 aa13.68□□□□□ -0.22
PLOD3-216ENST00000489927 NXNQ6DKJ4 435 aa13.68□□□□□ -0.22
PLOD3-216ENST00000489927 WDR93Q6P2C0 686 aa13.68□□□□□ -0.22
PLOD3-216ENST00000489927 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.68□□□□□ -0.22
PLOD3-216ENST00000489927 SLC35B4Q969S0 331 aa13.68□□□□□ -0.22
PLOD3-216ENST00000489927 MS4A3Q96HJ5 214 aa13.68□□□□□ -0.22
PLOD3-216ENST00000489927 ITCHQ96J02 903 aa13.68□□□□□ -0.22
PLOD3-216ENST00000489927 RSPO3Q9BXY4 272 aaPredicted RBP13.68□□□□□ -0.22
PLOD3-216ENST00000489927 MRPL37Q9BZE1 423 aaKnown RBP13.68□□□□□ -0.22
PLOD3-216ENST00000489927 RMND5AQ9H871 391 aa13.68□□□□□ -0.22
PLOD3-216ENST00000489927 BCL2L10Q9HD36 194 aa13.68□□□□□ -0.22
PLOD3-216ENST00000489927 B3GNT2Q9NY97 397 aa13.68□□□□□ -0.22
PLOD3-216ENST00000489927 RPS6KB2Q9UBS0 482 aa13.68□□□□□ -0.22
PLOD3-216ENST00000489927 CMAHPQ9Y471 501 aa13.68□□□□□ -0.22
PLOD3-216ENST00000489927 IGKV1D-42A0A075B6H8 117 aa13.67□□□□□ -0.22
PLOD3-216ENST00000489927 LOC102725191A0A1B0GVB3 256 aa13.67□□□□□ -0.22
PLOD3-216ENST00000489927 AKAP8O43823 692 aaKnown RBP13.67□□□□□ -0.22
PLOD3-216ENST00000489927 HPRP00739 348 aa13.67□□□□□ -0.22
PLOD3-216ENST00000489927 CBLP22681 906 aa13.67□□□□□ -0.22
PLOD3-216ENST00000489927 HTR2AP28223 471 aa13.67□□□□□ -0.22
PLOD3-216ENST00000489927 POU3F1Q03052 451 aaPredicted RBP13.67□□□□□ -0.22
PLOD3-216ENST00000489927 RGNQ15493 299 aa13.67□□□□□ -0.22
PLOD3-216ENST00000489927 TNFAIP8L3Q5GJ75 292 aa13.67□□□□□ -0.22
PLOD3-216ENST00000489927 CARD17Q5XLA6 110 aa13.67□□□□□ -0.22
PLOD3-216ENST00000489927 UGT2A3Q6UWM9 527 aa13.67□□□□□ -0.22
PLOD3-216ENST00000489927 H1FNTQ75WM6 255 aaPredicted RBP13.67□□□□□ -0.22
PLOD3-216ENST00000489927 OR9I1Q8NGQ6 314 aa13.67□□□□□ -0.22
PLOD3-216ENST00000489927 SLC38A4Q969I6 547 aa13.67□□□□□ -0.22
PLOD3-216ENST00000489927 MRPL24Q96A35 216 aaKnown RBP13.67□□□□□ -0.22
PLOD3-216ENST00000489927 C12orf10Q9HB07 376 aa13.67□□□□□ -0.22
PLOD3-216ENST00000489927 A4GALTQ9NPC4 353 aa13.67□□□□□ -0.22
PLOD3-216ENST00000489927 SDR39U1Q9NRG7 319 aaPredicted RBP13.67□□□□□ -0.22
PLOD3-216ENST00000489927 THAP1Q9NVV9 213 aa13.67□□□□□ -0.22
PLOD3-216ENST00000489927 ZIM2Q9NZV7 527 aa13.67□□□□□ -0.22
PLOD3-216ENST00000489927 REV1Q9UBZ9 1251 aa13.67□□□□□ -0.22
PLOD3-216ENST00000489927 TENM1Q9UKZ4 2725 aa13.67□□□□□ -0.22
PLOD3-216ENST00000489927 TRAV36DV7A0A075B6V5 113 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 A0A1B0GWA3 101 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 B4DSR2 109 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 MS4A18H0YCH9 400 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 M0R233 179 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms