RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 OAZ3Q9UMX2 235 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 SAMHD1Q9Y3Z3 626 aaKnown RBP9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 FAM32AQ9Y421 112 aaKnown RBP9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 ANKRD17O75179 2603 aaKnown RBP9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 TMED7-TICAM2A0A0A6YYA0 188 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 TMEM72A0PK05 275 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 ZC3H12DA2A288 527 aaKnown RBP9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 SAC3D1A6NKF1 404 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 PDLIM1O00151 329 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 SOCS2O14508 198 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 KLF4O43474 513 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 FZD7O75084 574 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 E2F6O75461 281 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 OPN1LWP04000 364 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 POU2F1P14859 743 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 PRKACGP22612 351 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 CBLP22681 906 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 SHC1P29353 583 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 SFTPDP35247 375 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 POLR2HP52434 150 aaKnown RBP9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 SH3BGRP55822 239 aaPredicted RBP9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 COPZ1P61923 177 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 PPP2R2BQ00005 443 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 FAM27E3Q08E93 113 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 MERTKQ12866 999 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 DAG1Q14118 895 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 MICAQ29983 383 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 FGD3Q5JSP0 725 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 ZNF474Q6S9Z5 364 aaPredicted RBP9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 P3H2Q8IVL5 708 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 ZNF610Q8N9Z0 462 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 ZNF555Q8NEP9 628 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 OR4K5Q8NGD3 323 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 OR9Q2Q8NGE9 314 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 PFN4Q8NHR9 129 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 ZNF563Q8TA94 476 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 ACOT11Q8WXI4 607 aaPredicted RBP9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 TMEM234Q8WY98 164 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 NRGNQ92686 78 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 TFAP2CQ92754 450 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 OSTF1Q92882 214 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 MPP4Q96JB8 637 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 ALPK1Q96QP1 1244 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 PTDSS2Q9BVG9 487 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 ZNF696Q9H7X3 374 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 FANCFQ9NPI8 374 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 PLSCR4Q9NRQ2 329 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 C20orf141Q9NUB4 165 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 USE1Q9NZ43 259 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 TMEFF2Q9UIK5 374 aaPredicted RBP9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 ST6GALNAC2Q9UJ37 374 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 TMED7Q9Y3B3 224 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 TACC2O95359 2948 aa9.4□□□□□ -0.9
SCAMP4-208ENST00000489554 MED12LQ86YW9 2145 aa9.4□□□□□ -0.91
SCAMP4-208ENST00000489554 SPG11Q96JI7 2443 aa9.4□□□□□ -0.91
SCAMP4-208ENST00000489554 ARRDC5A6NEK1 342 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 A6NHS1 94 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 C16orf97H3BN30 126 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 DLGAP1O14490 977 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 HRGP04196 525 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 TP53P04637 393 aaPredicted RBP9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 PNMTP11086 282 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 DNASE1P24855 282 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 UGT2B10P36537 528 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 APOBEC1P41238 236 aaKnown RBP9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 RBM34P42696 430 aaKnown RBP9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 OMPP47874 163 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 DAPP51397 102 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 ART1P52961 327 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 SMIM11AP58511 58 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 LTBQ06643 244 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 FOXD4Q12950 439 aaPredicted RBP9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 IL18R1Q13478 541 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 FHL1Q13642 323 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 RNPS1Q15287 305 aaKnown RBP9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 ZNF239Q16600 458 aaKnown RBP9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 TMEM176BQ3YBM2 270 aaPredicted RBP9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 C3orf33Q6P1S2 294 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 PGBD2Q6P3X8 592 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 FAHD1Q6P587 224 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 UGT2A3Q6UWM9 527 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 MBOAT2Q6ZWT7 520 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 SLC46A3Q7Z3Q1 461 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 ZER1Q7Z7L7 766 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 STK32CQ86UX6 486 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 MEX3DQ86XN8 651 aaKnown RBP9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 OR10G2Q8NGC3 310 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 MAGEE2Q8TD90 523 aaPredicted RBP9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 RNF128Q8TEB7 428 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 TMEM239Q8WW34 195 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 CNBD2Q96M20 576 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 FOXC2Q99958 501 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 TMEM43Q9BTV4 400 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 MED18Q9BUE0 208 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 ADI1Q9BV57 179 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 MRPS26Q9BYN8 205 aaKnown RBP9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 OR11A1Q9GZK7 315 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 GP6Q9HCN6 339 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 SERINC1Q9NRX5 453 aa9.39□□□□□ -0.91
SCAMP4-208ENST00000489554 ZNF226Q9NYT6 803 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms