RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 IL1RL1Q01638 556 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 POU3F1Q03052 451 aaPredicted RBP8.53□□□□□ -1.04
MCF2L-227ENST00000486806 RBPJQ06330 500 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 NPRL3Q12980 569 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 SF3B4Q15427 424 aaKnown RBP eCLIP8.53□□□□□ -1.04
MCF2L-227ENST00000486806 GUSBP1Q15486 140 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 PGGHGQ32M88 737 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 SOWAHCQ53LP3 525 aaPredicted RBP8.53□□□□□ -1.04
MCF2L-227ENST00000486806 CLEC12AQ5QGZ9 265 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 C1orf185Q5T7R7 199 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 ZNF585AQ6P3V2 769 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 IZUMO2Q6UXV1 221 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 DPY19L2P2Q6ZN68 376 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 CHMP1BQ7LBR1 199 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 IGFN1Q86VF2 1251 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 DOLPP1Q86YN1 238 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 KDM8Q8N371 416 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 ZNF843Q8N446 348 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 RPRMLQ8N4K4 120 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 ANKK1Q8NFD2 765 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 OR2T33Q8NG76 320 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 OR9K2Q8NGE7 335 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 OR52L1Q8NGH7 329 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 OR4Q3Q8NH05 313 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 MBD3L2Q8NHZ7 208 aaPredicted RBP8.53□□□□□ -1.04
MCF2L-227ENST00000486806 TEX47Q8TBZ9 253 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 WNT2BQ93097 391 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 SAMD8Q96LT4 415 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 OXGR1Q96P68 337 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 TRIB1Q96RU8 372 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 PITX2Q99697 317 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 KATNB1Q9BVA0 655 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 TP63Q9H3D4 680 aaPredicted RBP8.53□□□□□ -1.04
MCF2L-227ENST00000486806 RIBC2Q9H4K1 309 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 CALHM2Q9HA72 323 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 BCO1Q9HAY6 547 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 SLC25A19Q9HC21 320 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 GP6Q9HCN6 339 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 INIPQ9NRY2 104 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 KLHL9Q9P2J3 617 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 KLHL13Q9P2N7 655 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 IL20RAQ9UHF4 553 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 TINAGQ9UJW2 476 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 ORC6Q9Y5N6 252 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 NOX1Q9Y5S8 564 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 KALRNO60229 2985 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 B8ZZF3 427 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 C11orf98E9PRG8 122 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 ARPC3O15145 178 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 SS18L1O75177 396 aaPredicted RBP8.52□□□□□ -1.05
MCF2L-227ENST00000486806 OR6A2O95222 327 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 PPP1R3DO95685 299 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 TXNDC12O95881 172 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 PLGP00747 810 aaPredicted RBP8.52□□□□□ -1.05
MCF2L-227ENST00000486806 PRB1P04280 392 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 HOXD4P09016 255 aaPredicted RBP8.52□□□□□ -1.05
MCF2L-227ENST00000486806 AHCYP23526 432 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 SDHAP31040 664 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 GIPRP48546 466 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 CTXN1P60606 82 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 CDK5Q00535 292 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 RASGEF1BQ0VAM2 473 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 PTGES3Q15185 160 aaKnown RBP8.52□□□□□ -1.05
MCF2L-227ENST00000486806 RNPS1Q15287 305 aaKnown RBP8.52□□□□□ -1.05
MCF2L-227ENST00000486806 TAF11Q15544 211 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 ACKR1Q16570 336 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 ZIK1Q3SY52 487 aaPredicted RBP8.52□□□□□ -1.05
MCF2L-227ENST00000486806 SLX4IPQ5VYV7 408 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 C12orf73Q69YU5 71 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 TMEM225Q6GV28 225 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 SLC27A4Q6P1M0 643 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 RPTNQ6XPR3 784 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 CREB3L2Q70SY1 520 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 GPAT4Q86UL3 456 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 WDFY1Q8IWB7 410 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 UEVLDQ8IX04 471 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 LNX2Q8N448 690 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 IQCF1Q8N6M8 205 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 ZIC4Q8N9L1 334 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 C9orf106Q8NAJ2 232 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 ZNF519Q8TB69 540 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 TMEM45BQ96B21 275 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 ZNF570Q96NI8 536 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 TSPAN32Q96QS1 320 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 ADI1Q9BV57 179 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 TSSK6Q9BXA6 273 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 POLDIP3Q9BY77 421 aaKnown RBP8.52□□□□□ -1.05
MCF2L-227ENST00000486806 NDEL1Q9GZM8 345 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 NDRG4Q9ULP0 352 aaKnown RBP8.52□□□□□ -1.05
MCF2L-227ENST00000486806 BAIAP2Q9UQB8 552 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 ADAM18Q9Y3Q7 739 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 FLVCR1Q9Y5Y0 555 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 ZNF407Q9C0G0 2248 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 KIAA1549Q9HCM3 1950 aa8.52□□□□□ -1.05
MCF2L-227ENST00000486806 TEX13CA0A0J9YWL9 993 aa8.51□□□□□ -1.05
MCF2L-227ENST00000486806 A0A1W2PRG6 482 aa8.51□□□□□ -1.05
MCF2L-227ENST00000486806 ZNF724A8MTY0 619 aa8.51□□□□□ -1.05
MCF2L-227ENST00000486806 IMPA2O14732 288 aa8.51□□□□□ -1.05
MCF2L-227ENST00000486806 SLC16A6O15403 523 aa8.51□□□□□ -1.05
MCF2L-227ENST00000486806 ZNF432O94892 652 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms