RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 ALG10Q5BKT4 473 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 ABLIM2Q6H8Q1 611 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 SMARCD3Q6STE5 483 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 CD300LDQ6UXZ3 194 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 RASSF6Q6ZTQ3 369 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 SLC43A2Q8N370 569 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 GALNT4Q8N4A0 578 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 LRRC75AQ8NAA5 344 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 NAXEQ8NCW5 288 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 MBD3L2Q8NHZ7 208 aaPredicted RBP12.57□□□□□ -0.4
SRSF6-202ENST00000483871 INTS12Q96CB8 462 aaKnown RBP12.57□□□□□ -0.4
SRSF6-202ENST00000483871 TXNDC15Q96J42 360 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 SAMD8Q96LT4 415 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 OXGR1Q96P68 337 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 ZNF385AQ96PM9 386 aaKnown RBP12.57□□□□□ -0.4
SRSF6-202ENST00000483871 C9orf16Q9BUW7 83 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 RASD1Q9Y272 281 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 PCNX1Q96RV3 2341 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 CCL21O00585 134 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 HOXD4P09016 255 aaPredicted RBP12.57□□□□□ -0.4
SRSF6-202ENST00000483871 ZNF43P17038 809 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 GSTM3P21266 225 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 POLR2IP36954 125 aaKnown RBP12.57□□□□□ -0.4
SRSF6-202ENST00000483871 CASP6P55212 293 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 CTXN1P60606 82 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 POU3F1Q03052 451 aaPredicted RBP12.57□□□□□ -0.4
SRSF6-202ENST00000483871 COX10Q12887 443 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 RFX4Q33E94 735 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 SLC36A3Q495N2 470 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 CLEC12AQ5QGZ9 265 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 OGFRL1Q5TC84 451 aaPredicted RBP12.57□□□□□ -0.4
SRSF6-202ENST00000483871 NHLRC1Q6VVB1 395 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 ZNF620Q6ZNG0 422 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 FJX1Q86VR8 437 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 WDFY1Q8IWB7 410 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 ZIC4Q8N9L1 334 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 ADPRHL1Q8NDY3 354 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 OR9K2Q8NGE7 335 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 OR8D4Q8NGM9 314 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 FANK1Q8TC84 345 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 RBM4BQ9BQ04 359 aaKnown RBP12.57□□□□□ -0.4
SRSF6-202ENST00000483871 RBM4Q9BWF3 364 aaKnown RBP12.57□□□□□ -0.4
SRSF6-202ENST00000483871 PAPOLBQ9NRJ5 636 aaKnown RBP12.57□□□□□ -0.4
SRSF6-202ENST00000483871 KRT84Q9NSB2 600 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 MED29Q9NX70 200 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 IL20Q9NYY1 176 aa12.57□□□□□ -0.4
SRSF6-202ENST00000483871 A0A1W2PNV4 684 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 E9PLN8 166 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 H3BN98 237 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 NDUFB2O95178 105 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 VAMP5O95183 116 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 RCBTB2O95199 551 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 OSMP13725 252 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 IGFBP5P24593 272 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 POU1F1P28069 291 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 EPHA2P29317 976 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 RPL4P36578 427 aaKnown RBP12.56□□□□□ -0.4
SRSF6-202ENST00000483871 ALDH3A2P51648 485 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 PER3P56645 1201 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 PRPS1P60891 318 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 MELKQ14680 651 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 GTF2IRD2BQ6EKJ0 949 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 CREB3L2Q70SY1 520 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.56□□□□□ -0.4
SRSF6-202ENST00000483871 PXKQ7Z7A4 578 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 GTF2IRD2Q86UP8 949 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 MCEMP1Q8IX19 187 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 DMRTA2Q96SC8 542 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 VKORC1Q9BQB6 163 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 EMC6Q9BV81 110 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 SF3B5Q9BWJ5 86 aaKnown RBP12.56□□□□□ -0.4
SRSF6-202ENST00000483871 FANCFQ9NPI8 374 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 USE1Q9NZ43 259 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 KLHL9Q9P2J3 617 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 MEMO1Q9Y316 297 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 ADAM18Q9Y3Q7 739 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 FLVCR1Q9Y5Y0 555 aa12.56□□□□□ -0.4
SRSF6-202ENST00000483871 ZNF462Q96JM2 2506 aa12.55□□□□□ -0.4
SRSF6-202ENST00000483871 LOC102725191A0A1B0GVB3 256 aa12.55□□□□□ -0.4
SRSF6-202ENST00000483871 LRRTM2O43300 516 aa12.55□□□□□ -0.4
SRSF6-202ENST00000483871 TRAF3IP2O43734 574 aaPredicted RBP12.55□□□□□ -0.4
SRSF6-202ENST00000483871 IL2RAP01589 272 aa12.55□□□□□ -0.4
SRSF6-202ENST00000483871 FCGR2AP12318 317 aa12.55□□□□□ -0.4
SRSF6-202ENST00000483871 IFNGR1P15260 489 aa12.55□□□□□ -0.4
SRSF6-202ENST00000483871 EDNRAP25101 427 aa12.55□□□□□ -0.4
SRSF6-202ENST00000483871 CEACAM8P31997 349 aaPredicted RBP12.55□□□□□ -0.4
SRSF6-202ENST00000483871 TIMP3P35625 211 aa12.55□□□□□ -0.4
SRSF6-202ENST00000483871 SLC16A1P53985 500 aa12.55□□□□□ -0.4
SRSF6-202ENST00000483871 CLDN17P56750 224 aa12.55□□□□□ -0.4
SRSF6-202ENST00000483871 ERVK-25P63136 954 aa12.55□□□□□ -0.4
SRSF6-202ENST00000483871 C1DQ13901 141 aaKnown RBP12.55□□□□□ -0.4
SRSF6-202ENST00000483871 RNPS1Q15287 305 aaKnown RBP12.55□□□□□ -0.4
SRSF6-202ENST00000483871 POU4F3Q15319 338 aa12.55□□□□□ -0.4
SRSF6-202ENST00000483871 ZIK1Q3SY52 487 aaPredicted RBP12.55□□□□□ -0.4
SRSF6-202ENST00000483871 ANKDD1AQ495B1 522 aa12.55□□□□□ -0.4
SRSF6-202ENST00000483871 EEF1A1P5Q5VTE0 462 aa12.55□□□□□ -0.4
SRSF6-202ENST00000483871 TMEM236Q5W0B7 351 aa12.55□□□□□ -0.4
SRSF6-202ENST00000483871 NUFIP2Q7Z417 695 aaKnown RBP12.55□□□□□ -0.4
SRSF6-202ENST00000483871 ATCAYQ86WG3 371 aa12.55□□□□□ -0.4
SRSF6-202ENST00000483871 UEVLDQ8IX04 471 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms