RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, human

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-215	ENST00000482714	ARHGAP21	Q5T5U3	1957 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	IGHV3-15	A0A0B4J1V0	119 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	ZNF814	B7Z6K7	855 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	AKAP8	O43823	692 aa	Known RBP	13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	NDUFB2	O95178	105 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	CNOT4	O95628	575 aa	Known RBP	13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	PTN	P21246	168 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	AHCY	P23526	432 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	GPR4	P46093	362 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	RPL18	Q07020	188 aa	Known RBP	13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	FHL1	Q13642	323 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	C1D	Q13901	141 aa	Known RBP	13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	RFX4	Q33E94	735 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	ALG10	Q5BKT4	473 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	FAHD1	Q6P587	224 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	XKRX	Q6PP77	449 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	GPAT4	Q86UL3	456 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	STK32C	Q86UX6	486 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	FJX1	Q86VR8	437 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	TUSC5	Q8IXB3	177 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	MARVELD2	Q8N4S9	558 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	OR9Q2	Q8NGE9	314 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	OR6K3	Q8NGY3	331 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	OR51A7	Q8NH64	312 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	ADAD1	Q96M93	576 aa	Known RBP	13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	GPA33	Q99795	319 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	C9orf16	Q9BUW7	83 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	UCK2	Q9BZX2	261 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	SEMA6A	Q9H2E6	1030 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	PIGM	Q9H3S5	423 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	INIP	Q9NRY2	104 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714	FLVCR1	Q9Y5Y0	555 aa		13.65	□□□□□ -0.22
CCM2-215	ENST00000482714		A0A0G2JNJ9	132 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714		A0A1W2PRG6	482 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	CENPBD1	B2RD01	187 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	DVL2	O14641	736 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	RNF13	O43567	381 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	MGRN1	O60291	552 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	CD8B	P10966	210 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	APEH	P13798	732 aa	Known RBP	13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	ANPEP	P15144	967 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	PRKACG	P22612	351 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	CHRNB4	P30926	498 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	AQP2	P41181	271 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	KIR2DL2	P43627	348 aa	Predicted RBP	13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	SMARCD3	Q6STE5	483 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	DPY19L2P2	Q6ZN68	376 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	HDDC2	Q7Z4H3	204 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	MED12L	Q86YW9	2145 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	EPHX4	Q8IUS5	362 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	KDM8	Q8N371	416 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	PARP8	Q8N3A8	854 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	RPRML	Q8N4K4	120 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	ATG16L2	Q8NAA4	619 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	LRRC75A	Q8NAA5	344 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	ICA1L	Q8NDH6	482 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	GPX7	Q96SL4	187 aa	Predicted RBP	13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	RBM4B	Q9BQ04	359 aa	Known RBP	13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	RBM4	Q9BWF3	364 aa	Known RBP	13.64	□□□□□ -0.23
CCM2-215	ENST00000482714		Q9UFV3	132 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	OAZ3	Q9UMX2	235 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	RCE1	Q9Y256	329 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	NOSIP	Q9Y314	301 aa	Known RBP	13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	UBR5	O95071	2799 aa	Predicted RBP	13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	FLNC	Q14315	2725 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	FLNB	O75369	2602 aa	Known RBP	13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	DOCK7	Q96N67	2140 aa		13.64	□□□□□ -0.23
CCM2-215	ENST00000482714	KDM4E	B2RXH2	506 aa	Predicted RBP	13.63	□□□□□ -0.23
CCM2-215	ENST00000482714	IMPA2	O14732	288 aa		13.63	□□□□□ -0.23
CCM2-215	ENST00000482714	IDH3B	O43837	385 aa		13.63	□□□□□ -0.23
CCM2-215	ENST00000482714	RAMP1	O60894	148 aa		13.63	□□□□□ -0.23
CCM2-215	ENST00000482714	MRPL33	O75394	65 aa	Known RBP	13.63	□□□□□ -0.23
CCM2-215	ENST00000482714	TNFSF13	O75888	250 aa		13.63	□□□□□ -0.23
CCM2-215	ENST00000482714	POU2F1	P14859	743 aa		13.63	□□□□□ -0.23
CCM2-215	ENST00000482714	AGTR1	P30556	359 aa		13.63	□□□□□ -0.23
CCM2-215	ENST00000482714	PCYT1A	P49585	367 aa		13.63	□□□□□ -0.23
CCM2-215	ENST00000482714	RCN1	Q15293	331 aa		13.63	□□□□□ -0.23
CCM2-215	ENST00000482714	ZIC4	Q8N9L1	334 aa		13.63	□□□□□ -0.23
CCM2-215	ENST00000482714	LILRB4	Q8NHJ6	448 aa		13.63	□□□□□ -0.23
CCM2-215	ENST00000482714	CCDC120	Q96HB5	630 aa		13.63	□□□□□ -0.23
CCM2-215	ENST00000482714	TXNIP	Q9H3M7	391 aa		13.63	□□□□□ -0.23
CCM2-215	ENST00000482714	NRIP3	Q9NQ35	241 aa		13.63	□□□□□ -0.23
CCM2-215	ENST00000482714	SEC14L4	Q9UDX3	406 aa		13.63	□□□□□ -0.23
CCM2-215	ENST00000482714	RNF6	Q9Y252	685 aa		13.63	□□□□□ -0.23
CCM2-215	ENST00000482714	POFUT2	Q9Y2G5	429 aa		13.63	□□□□□ -0.23
CCM2-215	ENST00000482714	HIVEP3	Q5T1R4	2406 aa		13.63	□□□□□ -0.23
CCM2-215	ENST00000482714	TRAV27	A0A087WT01	109 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	WIPF3	A6NGB9	483 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	ZNF726	A6NNF4	738 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	ARPC3	O15145	178 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	AHCYL1	O43865	530 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	BCL10	O95999	233 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	HPR	P00739	348 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	IGHM	P01871	453 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	CD14	P08571	375 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	OSM	P13725	252 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	KLK2	P20151	261 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	SLC6A6	P31641	620 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	DAP3	P51398	398 aa	Known RBP	13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	CTXN1	P60606	82 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms