RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 NDUFAF4Q9P032 175 aa18.09■□□□□ 0.49
VARS-224ENST00000479051 hCG_2039718K7EN88 272 aa18.08■□□□□ 0.48
VARS-224ENST00000479051 FFAR1O14842 300 aa18.08■□□□□ 0.48
VARS-224ENST00000479051 SLC43A1O75387 559 aa18.08■□□□□ 0.48
VARS-224ENST00000479051 OR7A10O76100 309 aa18.08■□□□□ 0.48
VARS-224ENST00000479051 H1F0P07305 194 aaKnown RBP18.08■□□□□ 0.48
VARS-224ENST00000479051 ASAH2BP0C7U1 165 aa18.08■□□□□ 0.48
VARS-224ENST00000479051 FUT1P19526 365 aa18.08■□□□□ 0.48
VARS-224ENST00000479051 CRYGSP22914 178 aa18.08■□□□□ 0.48
VARS-224ENST00000479051 DNAJA1P31689 397 aaKnown RBP18.08■□□□□ 0.48
VARS-224ENST00000479051 SELENOPP49908 381 aa18.08■□□□□ 0.48
VARS-224ENST00000479051 RASSF2P50749 326 aa18.08■□□□□ 0.48
VARS-224ENST00000479051 SMIM11AP58511 58 aa18.08■□□□□ 0.48
VARS-224ENST00000479051 TSPO2Q5TGU0 170 aa18.08■□□□□ 0.48
VARS-224ENST00000479051 CYP2R1Q6VVX0 501 aa18.08■□□□□ 0.48
VARS-224ENST00000479051 CDK20Q8IZL9 346 aa18.08■□□□□ 0.48
VARS-224ENST00000479051 PIK3C3Q8NEB9 887 aa18.08■□□□□ 0.48
VARS-224ENST00000479051 HSD17B8Q92506 261 aa18.08■□□□□ 0.48
VARS-224ENST00000479051 C7orf34Q96L11 122 aa18.08■□□□□ 0.48
VARS-224ENST00000479051 LRGUKQ96M69 825 aa18.08■□□□□ 0.48
VARS-224ENST00000479051 TRIM15Q9C019 465 aa18.08■□□□□ 0.48
VARS-224ENST00000479051 NMNAT1Q9HAN9 279 aaPredicted RBP18.08■□□□□ 0.48
VARS-224ENST00000479051 RASSF1Q9NS23 344 aa18.08■□□□□ 0.48
VARS-224ENST00000479051 SLC7A10Q9NS82 523 aa18.08■□□□□ 0.48
VARS-224ENST00000479051 ZNF726A6NNF4 738 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 ZNF587BE7ETH6 402 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 C11orf98E9PRG8 122 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 RNF13O43567 381 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 TRAF3IP2O43734 574 aaPredicted RBP18.07■□□□□ 0.48
VARS-224ENST00000479051 CTAG2O75638 210 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 ATP5HO75947 161 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 PRSS23O95084 383 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 FABP3P05413 133 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 IFI30P13284 250 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 MPGP29372 298 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 VLDLRP98155 873 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 ZP4Q12836 540 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 TSC22D1Q15714 1073 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 OR7E24Q6IFN5 339 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 LCN8Q6JVE9 175 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 SLC46A3Q7Z3Q1 461 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 P2RY8Q86VZ1 359 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 LRRC17Q8N6Y2 441 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 ZNF433Q8N7K0 673 aaPredicted RBP18.07■□□□□ 0.48
VARS-224ENST00000479051 CCDC124Q96CT7 223 aaKnown RBP18.07■□□□□ 0.48
VARS-224ENST00000479051 BPIFA2Q96DR5 249 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 MUCL1Q96DR8 90 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 ASB9Q96DX5 294 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 PIP5K1AQ99755 562 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 BTBD10Q9BSF8 475 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 POLDIP3Q9BY77 421 aaKnown RBP18.07■□□□□ 0.48
VARS-224ENST00000479051 LINC00470Q9BZP3 86 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 CLEC4MQ9H2X3 399 aaPredicted RBP18.07■□□□□ 0.48
VARS-224ENST00000479051 NGBQ9NPG2 151 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 MAN2C1Q9NTJ4 1040 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 C20orf141Q9NUB4 165 aa18.07■□□□□ 0.48
VARS-224ENST00000479051 A0A1W2PRQ8 180 aa18.06■□□□□ 0.48
VARS-224ENST00000479051 BLOC1S5-TXNDC5H3BN57 136 aa18.06■□□□□ 0.48
VARS-224ENST00000479051 SERPINI2O75830 405 aa18.06■□□□□ 0.48
VARS-224ENST00000479051 HPRP00739 348 aa18.06■□□□□ 0.48
VARS-224ENST00000479051 ATP6V1B2P21281 511 aa18.06■□□□□ 0.48
VARS-224ENST00000479051 DGCR6Q14129 220 aa18.06■□□□□ 0.48
VARS-224ENST00000479051 STK11Q15831 433 aa18.06■□□□□ 0.48
VARS-224ENST00000479051 FGD3Q5JSP0 725 aa18.06■□□□□ 0.48
VARS-224ENST00000479051 NRMQ8IXM6 262 aa18.06■□□□□ 0.48
VARS-224ENST00000479051 GPR137CQ8N3F9 429 aa18.06■□□□□ 0.48
VARS-224ENST00000479051 LIPHQ8WWY8 451 aa18.06■□□□□ 0.48
VARS-224ENST00000479051 ZNF347Q96SE7 839 aa18.06■□□□□ 0.48
VARS-224ENST00000479051 KRCC1Q9NPI7 259 aaPredicted RBP18.06■□□□□ 0.48
VARS-224ENST00000479051 TMEM5Q9Y2B1 443 aa18.06■□□□□ 0.48
VARS-224ENST00000479051 FAM221AA4D161 298 aa18.05■□□□□ 0.48
VARS-224ENST00000479051 PIP5K1CO60331 668 aa18.05■□□□□ 0.48
VARS-224ENST00000479051 RAD51DO75771 328 aa18.05■□□□□ 0.48
VARS-224ENST00000479051 SEMG1P04279 462 aa18.05■□□□□ 0.48
VARS-224ENST00000479051 SAGP10523 405 aaPredicted RBP18.05■□□□□ 0.48
VARS-224ENST00000479051 HLA-DOBP13765 273 aa18.05■□□□□ 0.48
VARS-224ENST00000479051 HOXC12P31275 282 aa18.05■□□□□ 0.48
VARS-224ENST00000479051 PRKCDQ05655 676 aa18.05■□□□□ 0.48
VARS-224ENST00000479051 TRAP1Q12931 704 aaKnown RBP18.05■□□□□ 0.48
VARS-224ENST00000479051 BNIP1Q12981 228 aa18.05■□□□□ 0.48
VARS-224ENST00000479051 BEX5Q5H9J7 111 aa18.05■□□□□ 0.48
VARS-224ENST00000479051 TIMM23BQ5SRD1 257 aa18.05■□□□□ 0.48
VARS-224ENST00000479051 HMBOX1Q6NT76 420 aa18.05■□□□□ 0.48
VARS-224ENST00000479051 MBOAT2Q6ZWT7 520 aa18.05■□□□□ 0.48
VARS-224ENST00000479051 TSEN54Q7Z6J9 526 aaKnown RBP18.05■□□□□ 0.48
VARS-224ENST00000479051 WFDC8Q8IUA0 241 aa18.05■□□□□ 0.48
VARS-224ENST00000479051 C1orf162Q8NEQ5 155 aaPredicted RBP18.05■□□□□ 0.48
VARS-224ENST00000479051 CLPTM1LQ96KA5 538 aa18.05■□□□□ 0.48
VARS-224ENST00000479051 LURAP1Q96LR2 239 aa18.05■□□□□ 0.48
VARS-224ENST00000479051 ADAD1Q96M93 576 aaKnown RBP18.05■□□□□ 0.48
VARS-224ENST00000479051 ALKBH3Q96Q83 286 aaPredicted RBP18.05■□□□□ 0.48
VARS-224ENST00000479051 IL1RAPQ9NPH3 570 aa18.05■□□□□ 0.48
VARS-224ENST00000479051 B3GAT2Q9NPZ5 323 aa18.05■□□□□ 0.48
VARS-224ENST00000479051 TAS2R5Q9NYW4 299 aa18.05■□□□□ 0.48
VARS-224ENST00000479051 NBPF19A0A087WUL8 3843 aa18.04■□□□□ 0.48
VARS-224ENST00000479051 A0A087WUU8 490 aa18.04■□□□□ 0.48
VARS-224ENST00000479051 A0A1W2PRG6 482 aa18.04■□□□□ 0.48
VARS-224ENST00000479051 CYSRT1A8MQ03 144 aa18.04■□□□□ 0.48
VARS-224ENST00000479051 PDLIM1O00151 329 aa18.04■□□□□ 0.48
VARS-224ENST00000479051 DNAJC8O75937 253 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms