RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 WIPF1O43516 503 aa12.09□□□□□ -0.47
CCDC78-209ENST00000474647 SLC43A1O75387 559 aa12.09□□□□□ -0.47
CCDC78-209ENST00000474647 BCHEP06276 602 aa12.09□□□□□ -0.47
CCDC78-209ENST00000474647 TFPTP0C1Z6 253 aa12.09□□□□□ -0.47
CCDC78-209ENST00000474647 PNMTP11086 282 aa12.09□□□□□ -0.47
CCDC78-209ENST00000474647 PRG2P13727 222 aa12.09□□□□□ -0.47
CCDC78-209ENST00000474647 CBR1P16152 277 aa12.09□□□□□ -0.47
CCDC78-209ENST00000474647 ZNF43P17038 809 aa12.09□□□□□ -0.47
CCDC78-209ENST00000474647 ACAA2P42765 397 aaKnown RBP12.09□□□□□ -0.47
CCDC78-209ENST00000474647 RPL14P50914 215 aaKnown RBP12.09□□□□□ -0.47
CCDC78-209ENST00000474647 DVL1P1P54792 670 aaPredicted RBP12.09□□□□□ -0.47
CCDC78-209ENST00000474647 UFM1P61960 85 aa12.09□□□□□ -0.47
CCDC78-209ENST00000474647 TXNL4AP83876 142 aaKnown RBP12.09□□□□□ -0.47
CCDC78-209ENST00000474647 RIN1Q13671 783 aa12.09□□□□□ -0.47
CCDC78-209ENST00000474647 CEACAM16Q2WEN9 425 aa12.09□□□□□ -0.47
CCDC78-209ENST00000474647 RPS26P11Q5JNZ5 115 aaPredicted RBP12.09□□□□□ -0.47
CCDC78-209ENST00000474647 SHQ1Q6PI26 577 aaKnown RBP12.09□□□□□ -0.47
CCDC78-209ENST00000474647 UGT2A3Q6UWM9 527 aa12.09□□□□□ -0.47
CCDC78-209ENST00000474647 MDP1Q86V88 176 aa12.09□□□□□ -0.47
CCDC78-209ENST00000474647 CACYBPQ9HB71 228 aaKnown RBP12.09□□□□□ -0.47
CCDC78-209ENST00000474647 LPAR2Q9HBW0 351 aa12.09□□□□□ -0.47
CCDC78-209ENST00000474647 NOX3Q9HBY0 568 aa12.09□□□□□ -0.47
CCDC78-209ENST00000474647 SEC14L4Q9UDX3 406 aa12.09□□□□□ -0.47
CCDC78-209ENST00000474647 A0A096LPI6 279 aa12.08□□□□□ -0.48
CCDC78-209ENST00000474647 TMEM129A0AVI4 362 aa12.08□□□□□ -0.48
CCDC78-209ENST00000474647 TMEM229AB2RXF0 380 aa12.08□□□□□ -0.48
CCDC78-209ENST00000474647 B4DSR2 109 aa12.08□□□□□ -0.48
CCDC78-209ENST00000474647 SPRY1O43609 319 aaPredicted RBP12.08□□□□□ -0.48
CCDC78-209ENST00000474647 VENTXO95231 258 aa12.08□□□□□ -0.48
CCDC78-209ENST00000474647 ALDOCP09972 364 aaKnown RBP12.08□□□□□ -0.48
CCDC78-209ENST00000474647 HOXB1P14653 301 aaPredicted RBP12.08□□□□□ -0.48
CCDC78-209ENST00000474647 ARR3P36575 388 aa12.08□□□□□ -0.48
CCDC78-209ENST00000474647 CRATP43155 626 aa12.08□□□□□ -0.48
CCDC78-209ENST00000474647 LARS2Q15031 903 aaKnown RBP12.08□□□□□ -0.48
CCDC78-209ENST00000474647 THSD4Q6ZMP0 1018 aa12.08□□□□□ -0.48
CCDC78-209ENST00000474647 SERPINA11Q86U17 422 aa12.08□□□□□ -0.48
CCDC78-209ENST00000474647 FAM169BQ8N8A8 192 aa12.08□□□□□ -0.48
CCDC78-209ENST00000474647 GPR35Q9HC97 309 aa12.08□□□□□ -0.48
CCDC78-209ENST00000474647 SLCO1B3Q9NPD5 702 aa12.08□□□□□ -0.48
CCDC78-209ENST00000474647 CALML5Q9NZT1 146 aa12.08□□□□□ -0.48
CCDC78-209ENST00000474647 USP22Q9UPT9 525 aa12.08□□□□□ -0.48
CCDC78-209ENST00000474647 RCE1Q9Y256 329 aa12.08□□□□□ -0.48
CCDC78-209ENST00000474647 CMAHPQ9Y471 501 aa12.08□□□□□ -0.48
CCDC78-209ENST00000474647 MEGF8Q7Z7M0 2845 aa12.07□□□□□ -0.48
CCDC78-209ENST00000474647 FTCDNL1E5RQL4 147 aa12.07□□□□□ -0.48
CCDC78-209ENST00000474647 M0R233 179 aa12.07□□□□□ -0.48
CCDC78-209ENST00000474647 RFXANKO14593 260 aa12.07□□□□□ -0.48
CCDC78-209ENST00000474647 POLR3GO15318 223 aaPredicted RBP12.07□□□□□ -0.48
CCDC78-209ENST00000474647 KRT75O95678 551 aa12.07□□□□□ -0.48
CCDC78-209ENST00000474647 IGFBP1P08833 259 aaPredicted RBP12.07□□□□□ -0.48
CCDC78-209ENST00000474647 ETFAP13804 333 aa12.07□□□□□ -0.48
CCDC78-209ENST00000474647 TCN1P20061 433 aaPredicted RBP12.07□□□□□ -0.48
CCDC78-209ENST00000474647 IL12AP29459 219 aa12.07□□□□□ -0.48
CCDC78-209ENST00000474647 GPR6P46095 362 aaPredicted RBP12.07□□□□□ -0.48
CCDC78-209ENST00000474647 CRISP3P54108 245 aa12.07□□□□□ -0.48
CCDC78-209ENST00000474647 GYS2P54840 703 aa12.07□□□□□ -0.48
CCDC78-209ENST00000474647 C1DQ13901 141 aaKnown RBP12.07□□□□□ -0.48
CCDC78-209ENST00000474647 MAPK11Q15759 364 aa12.07□□□□□ -0.48
CCDC78-209ENST00000474647 RNF220Q5VTB9 566 aa12.07□□□□□ -0.48
CCDC78-209ENST00000474647 CLIP4Q8N3C7 705 aa12.07□□□□□ -0.48
CCDC78-209ENST00000474647 SEMA6DQ8NFY4 1073 aa12.07□□□□□ -0.48
CCDC78-209ENST00000474647 MFSD8Q8NHS3 518 aa12.07□□□□□ -0.48
CCDC78-209ENST00000474647 STK35Q8TDR2 534 aa12.07□□□□□ -0.48
CCDC78-209ENST00000474647 ZNF837Q96EG3 531 aaPredicted RBP12.07□□□□□ -0.48
CCDC78-209ENST00000474647 ZBTB18Q99592 522 aa12.07□□□□□ -0.48
CCDC78-209ENST00000474647 MRPL37Q9BZE1 423 aaKnown RBP12.07□□□□□ -0.48
CCDC78-209ENST00000474647 DSPPQ9NZW4 1301 aa12.07□□□□□ -0.48
CCDC78-209ENST00000474647 TANC2Q9HCD6 1990 aa12.07□□□□□ -0.48
CCDC78-209ENST00000474647 PKD1L1Q8TDX9 2849 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 ARHGAP32A7KAX9 2087 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 RPL36A-HNRNPH2H7BZ11 118 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 M0R3G1 203 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 SYNGR3O43761 229 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 AKAP8O43823 692 aaKnown RBP12.06□□□□□ -0.48
CCDC78-209ENST00000474647 EDF1O60869 148 aaKnown RBP12.06□□□□□ -0.48
CCDC78-209ENST00000474647 NPIPB7O75200 414 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 ZNF432O94892 652 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 ANP32DO95626 131 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 SAGP10523 405 aaPredicted RBP12.06□□□□□ -0.48
CCDC78-209ENST00000474647 CD79AP11912 226 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 CBLP22681 906 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 DSTNP60981 165 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 HOXC5Q00444 222 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 LRRC74AQ0VAA2 488 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 CARD17Q5XLA6 110 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 PIK3C3Q8NEB9 887 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 ANKK1Q8NFD2 765 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 CLDND2Q8NHS1 167 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 TMEM186Q96B77 213 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 KTI12Q96EK9 354 aaPredicted RBP12.06□□□□□ -0.48
CCDC78-209ENST00000474647 MS4A3Q96HJ5 214 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 OXGR1Q96P68 337 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 SYT3Q9BQG1 590 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 PTDSS2Q9BVG9 487 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 ARMC7Q9H6L4 198 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 MEAF6Q9HAF1 191 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 SLC6A13Q9NSD5 602 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 PNPOQ9NVS9 261 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 AIG1Q9NVV5 245 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 HIF1ANQ9NWT6 349 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms