RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 MMADHCQ9H3L0 296 aaPredicted RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 NOL11Q9H8H0 719 aaKnown RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 WDR41Q9HAD4 459 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 S100A14Q9HCY8 104 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 MID1IP1Q9NPA3 183 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 FARSBQ9NSD9 589 aaKnown RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 OLAHQ9NV23 265 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 AIG1Q9NVV5 245 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 DUS2Q9NX74 493 aaKnown RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 HAO2Q9NYQ3 351 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 TAS2R13Q9NYV9 303 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 HACD3Q9P035 362 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 IL36AQ9UHA7 158 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 CRLS1Q9UJA2 301 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 RPL26L1Q9UNX3 145 aaKnown RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 ERVW-1Q9UQF0 538 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 POMPQ9Y244 141 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 C15orf41Q9Y2V0 281 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 DHRS7Q9Y394 339 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 RNF11Q9Y3C5 154 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 PPIL1Q9Y3C6 166 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 GRIP1Q9Y3R0 1128 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 CCL27Q9Y4X3 112 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 OARD1Q9Y530 152 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 TIMM22Q9Y584 194 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 DNAJC15Q9Y5T4 150 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 USP24Q9UPU5 2620 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 USP9XQ93008 2570 aaPredicted RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 KIAA2026Q5HYC2 2103 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 DYNC2H1Q8NCM8 4307 aaKnown RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 DNAH1Q9P2D7 4330 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 TRRAPQ9Y4A5 3859 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 DOCK11Q5JSL3 2073 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 COL6A6A6NMZ7 2263 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 FCGBPQ9Y6R7 5405 aaPredicted RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 ZANQ9Y493 2812 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 SHANK1Q9Y566 2161 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 CXorf51AA0A1B0GTR3 108 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 A0A1W2PP18 115 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 A0A1W2PPV9 198 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 TCRBV3S1A0A5B6 114 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 SLC5A10A0PJK1 596 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 OR2AG2A6NM03 316 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 SYCE1LA8MT33 242 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 LOC730098B7Z3J9 87 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 E7EQ34 232 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 NPIPB9F8W1W9 429 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 TRIM77I1YAP6 450 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 K7EPI3 171 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 K7EQS6 105 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 PSMD11O00231 422 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 PSMD12O00232 456 aaPredicted RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 MANBAO00462 879 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 KPNA3O00505 521 aaPredicted RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 DLGAP1O14490 977 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 MRASO14807 208 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 CASQ2O14958 399 aaPredicted RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 ARPC2O15144 300 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 UBDO15205 165 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 RAD51BO15315 384 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 INPP4BO15327 924 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 NVLO15381 856 aaKnown RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 GYG2O15488 501 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 CFLARO15519 480 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 DFNA5O60443 496 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 PSIP1O75475 530 aaKnown RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 EEDO75530 441 aaKnown RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 CIB2O75838 187 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 BCAS2O75934 225 aaPredicted RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 RECQL5O94762 991 aaPredicted RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 TRIM16O95361 564 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 ANP32DO95626 131 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 PDYNP01213 254 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 PCCBP05166 539 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 ABCB1P08183 1280 aaPredicted RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 FGF4P08620 206 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 LINGO3P0C6S8 592 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 LINC00032P0C843 101 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 DANCRP0C864 163 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 UBTFL6P0CB48 400 aaPredicted RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 MPC1LP0DKB6 136 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 UROSP10746 265 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 ERGP11308 486 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 BCKDHAP12694 445 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 ADRB3P13945 408 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 NCK1P16333 377 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF7P17097 686 aaPredicted RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 HOXB8P17481 243 aaPredicted RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 LBPP18428 481 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 SDC1P18827 310 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 POLR2EP19388 210 aaKnown RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 TCN1P20061 433 aaPredicted RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 IL11P20809 199 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 ATP6V1C1P21283 382 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 AZGP1P25311 298 aaKnown RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 PTPN6P29350 595 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 PBLDP30039 288 aaPredicted RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 PEBP1P30086 187 aaKnown RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 MC5RP33032 325 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 VHLP40337 213 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms