RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 TMCC3Q9ULS5 477 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 TMEM5Q9Y2B1 443 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 FLVCR1Q9Y5Y0 555 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 MPDZO75970 2070 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 MBD3L4A6NDZ8 208 aaPredicted RBP8.78□□□□□ -1
SF3A1-207ENST00000471342 MBD3L3A6NE82 208 aaPredicted RBP8.78□□□□□ -1
SF3A1-207ENST00000471342 MBD3L5A6NJ08 208 aaPredicted RBP8.78□□□□□ -1
SF3A1-207ENST00000471342 WBP4O75554 376 aaKnown RBP8.78□□□□□ -1
SF3A1-207ENST00000471342 SCG5P05408 212 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 TFPIP10646 304 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 APEHP13798 732 aaKnown RBP8.78□□□□□ -1
SF3A1-207ENST00000471342 SLC2A5P22732 501 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 NOS3P29474 1203 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 PTGS2P35354 604 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 KIR2DL2P43627 348 aaPredicted RBP8.78□□□□□ -1
SF3A1-207ENST00000471342 EIF1AXP47813 144 aaKnown RBP8.78□□□□□ -1
SF3A1-207ENST00000471342 ZNF133P52736 654 aaPredicted RBP8.78□□□□□ -1
SF3A1-207ENST00000471342 FOXG1P55316 489 aaPredicted RBP8.78□□□□□ -1
SF3A1-207ENST00000471342 OR2B6P58173 313 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 ESRRGP62508 458 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 SLC35A1P78382 337 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 SRYQ05066 204 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 LGALS3BPQ08380 585 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 DOC2BQ14184 412 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 GINS1Q14691 196 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 PON3Q15166 354 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 CDSNQ15517 529 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 ACKR1Q16570 336 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 PGGHGQ32M88 737 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 ANKDD1AQ495B1 522 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 C6orf52Q5T4I8 152 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 LINC01590Q5TEZ4 76 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 AADACL4Q5VUY2 407 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 FAM180AQ6UWF9 173 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 RPTNQ6XPR3 784 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 NUFIP2Q7Z417 695 aaKnown RBP8.78□□□□□ -1
SF3A1-207ENST00000471342 BCDIN3DQ7Z5W3 292 aaKnown RBP8.78□□□□□ -1
SF3A1-207ENST00000471342 PXKQ7Z7A4 578 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 ATG16L2Q8NAA4 619 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 ST6GALNAC3Q8NDV1 305 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 OR9K2Q8NGE7 335 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 MBD3L2Q8NHZ7 208 aaPredicted RBP8.78□□□□□ -1
SF3A1-207ENST00000471342 RNF217Q8TC41 542 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 ASB10Q8WXI3 467 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 HDAC2Q92769 488 aaKnown RBP8.78□□□□□ -1
SF3A1-207ENST00000471342 ZNF837Q96EG3 531 aaPredicted RBP8.78□□□□□ -1
SF3A1-207ENST00000471342 RDH12Q96NR8 316 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 RASSF4Q9H2L5 321 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 MED29Q9NX70 200 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 SMPD3Q9NY59 655 aaPredicted RBP8.78□□□□□ -1
SF3A1-207ENST00000471342 POFUT2Q9Y2G5 429 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 ZNF175Q9Y473 711 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 CORINQ9Y5Q5 1042 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 COL6A6A6NMZ7 2263 aa8.78□□□□□ -1
SF3A1-207ENST00000471342 TRIM64A6NGJ6 449 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 AHRRA9YTQ3 701 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 FAM47E-STBD1D6RA91 191 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 SURF4O15260 269 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 PRKYO43930 277 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 SS18L1O75177 396 aaPredicted RBP8.77□□□□□ -1.01
SF3A1-207ENST00000471342 NDUFB2O95178 105 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 PPP1R3DO95685 299 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 CD14P08571 375 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 STSP08842 583 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 GLI4P10075 376 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 HIST1H1CP16403 213 aaKnown RBP8.77□□□□□ -1.01
SF3A1-207ENST00000471342 GSTM3P21266 225 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 GGT2P36268 569 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 VHLP40337 213 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 ERVK-25P63136 954 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 SRSF1Q07955 248 aaKnown RBP eCLIP8.77□□□□□ -1.01
SF3A1-207ENST00000471342 PUDPQ08623 228 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 MRPL49Q13405 166 aaKnown RBP8.77□□□□□ -1.01
SF3A1-207ENST00000471342 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.77□□□□□ -1.01
SF3A1-207ENST00000471342 LRFN4Q6PJG9 635 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 IZUMO2Q6UXV1 221 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 DPY19L2P2Q6ZN68 376 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 LIX1LQ8IVB5 337 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 RHOXF1Q8NHV9 184 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 CPT1CQ8TCG5 803 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 DNAJC9Q8WXX5 260 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 WNT2BQ93097 391 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 KISS1RQ969F8 398 aaPredicted RBP8.77□□□□□ -1.01
SF3A1-207ENST00000471342 CPNE4Q96A23 557 aaPredicted RBP8.77□□□□□ -1.01
SF3A1-207ENST00000471342 SARAFQ96BY9 339 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 MUS81Q96NY9 551 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 OXGR1Q96P68 337 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 OR2M2Q96R28 347 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 KCNK17Q96T54 332 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 ADI1Q9BV57 179 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 KATNB1Q9BVA0 655 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 SF3B5Q9BWJ5 86 aaKnown RBP8.77□□□□□ -1.01
SF3A1-207ENST00000471342 TSSK6Q9BXA6 273 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 TXNIPQ9H3M7 391 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 LDAHQ9H6V9 325 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 CALHM2Q9HA72 323 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 C8orf4Q9NR00 106 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 KRT84Q9NSB2 600 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 TINAGQ9UJW2 476 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 UGT2A1Q9Y4X1 527 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms