RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 SH3BGRL2Q9UJC5 107 aa13.52□□□□□ -0.25
NPHP4-205ENST00000466897 RRP15Q9Y3B9 282 aaKnown RBP13.52□□□□□ -0.25
NPHP4-205ENST00000466897 FLVCR1Q9Y5Y0 555 aa13.52□□□□□ -0.25
NPHP4-205ENST00000466897 TRAV27A0A087WT01 109 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 BLOC1S5-TXNDC5H3BN57 136 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 TRAF3IP2O43734 574 aaPredicted RBP13.51□□□□□ -0.25
NPHP4-205ENST00000466897 NDUFB2O95178 105 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 BAG2O95816 211 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 HPRP00739 348 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 PLGP00747 810 aaPredicted RBP13.51□□□□□ -0.25
NPHP4-205ENST00000466897 IGHMP01871 453 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 TMIGD3P0DMS9 266 aaPredicted RBP13.51□□□□□ -0.25
NPHP4-205ENST00000466897 ZNF43P17038 809 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 CTSSP25774 331 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 AGTR1P30556 359 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 AQP2P41181 271 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 PER3P56645 1201 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 FXYD6P3P58550 94 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 PPP2R2BQ00005 443 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 ALG10Q5BKT4 473 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 SMARCD3Q6STE5 483 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 CREB3L2Q70SY1 520 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 GPAT4Q86UL3 456 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 STK32CQ86UX6 486 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 MEX3DQ86XN8 651 aaKnown RBP13.51□□□□□ -0.25
NPHP4-205ENST00000466897 UEVLDQ8IX04 471 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 PARP8Q8N3A8 854 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 ATG16L2Q8NAA4 619 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 LRRC75AQ8NAA5 344 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 NAXEQ8NCW5 288 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 ICA1LQ8NDH6 482 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 OR6K3Q8NGY3 331 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 OR51A7Q8NH64 312 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 TNFRSF13CQ96RJ3 184 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 RBM4BQ9BQ04 359 aaKnown RBP13.51□□□□□ -0.25
NPHP4-205ENST00000466897 C9orf16Q9BUW7 83 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 RBM4Q9BWF3 364 aaKnown RBP13.51□□□□□ -0.25
NPHP4-205ENST00000466897 UCK2Q9BZX2 261 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 RNPEPL1Q9HAU8 725 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 C8orf4Q9NR00 106 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 IL20Q9NYY1 176 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 USE1Q9NZ43 259 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 KIF17Q9P2E2 1029 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 RCE1Q9Y256 329 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 SLC5A6Q9Y289 635 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 POFUT2Q9Y2G5 429 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 EMC9Q9Y3B6 208 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 MAGED1Q9Y5V3 778 aaPredicted RBP13.51□□□□□ -0.25
NPHP4-205ENST00000466897 CDH10Q9Y6N8 788 aa13.51□□□□□ -0.25
NPHP4-205ENST00000466897 FASNP49327 2511 aaKnown RBP13.51□□□□□ -0.25
NPHP4-205ENST00000466897 A0A0G2JNJ9 132 aa13.5□□□□□ -0.25
NPHP4-205ENST00000466897 CASQ2O14958 399 aaPredicted RBP13.5□□□□□ -0.25
NPHP4-205ENST00000466897 LRRTM2O43300 516 aa13.5□□□□□ -0.25
NPHP4-205ENST00000466897 RNF13O43567 381 aa13.5□□□□□ -0.25
NPHP4-205ENST00000466897 TNFSF13O75888 250 aa13.5□□□□□ -0.25
NPHP4-205ENST00000466897 APEHP13798 732 aaKnown RBP13.5□□□□□ -0.25
NPHP4-205ENST00000466897 ZNF26P17031 533 aaPredicted RBP13.5□□□□□ -0.25
NPHP4-205ENST00000466897 AGAP20933 346 aa13.5□□□□□ -0.25
NPHP4-205ENST00000466897 PRKACGP22612 351 aa13.5□□□□□ -0.25
NPHP4-205ENST00000466897 AHCYP23526 432 aa13.5□□□□□ -0.25
NPHP4-205ENST00000466897 OPRM1P35372 400 aa13.5□□□□□ -0.25
NPHP4-205ENST00000466897 KIR2DL2P43627 348 aaPredicted RBP13.5□□□□□ -0.25
NPHP4-205ENST00000466897 TMEM201Q5SNT2 666 aa13.5□□□□□ -0.25
NPHP4-205ENST00000466897 KDM4DQ6B0I6 523 aa13.5□□□□□ -0.25
NPHP4-205ENST00000466897 KLHL17Q6TDP4 642 aa13.5□□□□□ -0.25
NPHP4-205ENST00000466897 HDDC2Q7Z4H3 204 aa13.5□□□□□ -0.25
NPHP4-205ENST00000466897 FJX1Q86VR8 437 aa13.5□□□□□ -0.25
NPHP4-205ENST00000466897 TUSC5Q8IXB3 177 aa13.5□□□□□ -0.25
NPHP4-205ENST00000466897 ZIC4Q8N9L1 334 aa13.5□□□□□ -0.25
NPHP4-205ENST00000466897 MOSPD2Q8NHP6 518 aa13.5□□□□□ -0.25
NPHP4-205ENST00000466897 FANK1Q8TC84 345 aa13.5□□□□□ -0.25
NPHP4-205ENST00000466897 GTPBP3Q969Y2 492 aaKnown RBP13.5□□□□□ -0.25
NPHP4-205ENST00000466897 INTS12Q96CB8 462 aaKnown RBP13.5□□□□□ -0.25
NPHP4-205ENST00000466897 CCDC120Q96HB5 630 aa13.5□□□□□ -0.25
NPHP4-205ENST00000466897 OR52D1Q9H346 318 aa13.5□□□□□ -0.25
NPHP4-205ENST00000466897 INIPQ9NRY2 104 aa13.5□□□□□ -0.25
NPHP4-205ENST00000466897 PARPBPQ9NWS1 579 aa13.5□□□□□ -0.25
NPHP4-205ENST00000466897 Q9UFV3 132 aa13.5□□□□□ -0.25
NPHP4-205ENST00000466897 ENOPH1Q9UHY7 261 aa13.5□□□□□ -0.25
NPHP4-205ENST00000466897 RELNP78509 3460 aa13.49□□□□□ -0.25
NPHP4-205ENST00000466897 A0A1W2PRG6 482 aa13.49□□□□□ -0.25
NPHP4-205ENST00000466897 SAC3D1A6NKF1 404 aa13.49□□□□□ -0.25
NPHP4-205ENST00000466897 AKAP8O43823 692 aaKnown RBP13.49□□□□□ -0.25
NPHP4-205ENST00000466897 TP53P04637 393 aaPredicted RBP13.49□□□□□ -0.25
NPHP4-205ENST00000466897 CD14P08571 375 aa13.49□□□□□ -0.25
NPHP4-205ENST00000466897 POU2F1P14859 743 aa13.49□□□□□ -0.25
NPHP4-205ENST00000466897 SLC6A6P31641 620 aa13.49□□□□□ -0.25
NPHP4-205ENST00000466897 DAPP51397 102 aa13.49□□□□□ -0.25
NPHP4-205ENST00000466897 DAP3P51398 398 aaKnown RBP13.49□□□□□ -0.25
NPHP4-205ENST00000466897 ADORA2A-AS1P86434 159 aa13.49□□□□□ -0.25
NPHP4-205ENST00000466897 POU3F1Q03052 451 aaPredicted RBP13.49□□□□□ -0.25
NPHP4-205ENST00000466897 C1DQ13901 141 aaKnown RBP13.49□□□□□ -0.25
NPHP4-205ENST00000466897 RFX4Q33E94 735 aa13.49□□□□□ -0.25
NPHP4-205ENST00000466897 FAM205BPQ63HN1 556 aa13.49□□□□□ -0.25
NPHP4-205ENST00000466897 DPY19L2P2Q6ZN68 376 aa13.49□□□□□ -0.25
NPHP4-205ENST00000466897 GALNT5Q7Z7M9 940 aa13.49□□□□□ -0.25
NPHP4-205ENST00000466897 GCNT2Q8N0V5 402 aa13.49□□□□□ -0.25
NPHP4-205ENST00000466897 KDM8Q8N371 416 aa13.49□□□□□ -0.25
NPHP4-205ENST00000466897 ADAD1Q96M93 576 aaKnown RBP13.49□□□□□ -0.25
NPHP4-205ENST00000466897 CIB1Q99828 191 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms