RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 NCK1P16333 377 aa15.89■□□□□ 0.13
PDLIM2-215ENST00000456545 ZNF83P51522 516 aa15.89■□□□□ 0.13
PDLIM2-215ENST00000456545 PRPS1P60891 318 aa15.89■□□□□ 0.13
PDLIM2-215ENST00000456545 POU3F1Q03052 451 aaPredicted RBP15.89■□□□□ 0.13
PDLIM2-215ENST00000456545 BSPH1Q075Z2 132 aa15.89■□□□□ 0.13
PDLIM2-215ENST00000456545 ST3GAL3Q11203 375 aa15.89■□□□□ 0.13
PDLIM2-215ENST00000456545 GKAP1Q5VSY0 366 aaPredicted RBP15.89■□□□□ 0.13
PDLIM2-215ENST00000456545 CARD17Q5XLA6 110 aa15.89■□□□□ 0.13
PDLIM2-215ENST00000456545 TMEM108Q6UXF1 575 aa15.89■□□□□ 0.13
PDLIM2-215ENST00000456545 WDR88Q6ZMY6 472 aa15.89■□□□□ 0.13
PDLIM2-215ENST00000456545 DEPDC4Q8N2C3 294 aa15.89■□□□□ 0.13
PDLIM2-215ENST00000456545 C17orf78Q8N4C9 275 aa15.89■□□□□ 0.13
PDLIM2-215ENST00000456545 MBD6Q96DN6 1003 aa15.89■□□□□ 0.13
PDLIM2-215ENST00000456545 ALKBH3Q96Q83 286 aaPredicted RBP15.89■□□□□ 0.13
PDLIM2-215ENST00000456545 FNDC11Q9BVV2 318 aa15.89■□□□□ 0.13
PDLIM2-215ENST00000456545 LINC00470Q9BZP3 86 aa15.89■□□□□ 0.13
PDLIM2-215ENST00000456545 FKRPQ9H9S5 495 aa15.89■□□□□ 0.13
PDLIM2-215ENST00000456545 BEX4Q9NWD9 120 aaPredicted RBP15.89■□□□□ 0.13
PDLIM2-215ENST00000456545 B3GAT1Q9P2W7 334 aa15.89■□□□□ 0.13
PDLIM2-215ENST00000456545 RPS6KA6Q9UK32 745 aa15.89■□□□□ 0.13
PDLIM2-215ENST00000456545 POLQO75417 2590 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 DPRXA6NFQ7 191 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 M0R1B8 84 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 PDLIM1O00151 329 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 RNF13O43567 381 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 SMPD2O60906 423 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 FZD7O75084 574 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 LYPD3O95274 346 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 THRBP10828 461 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 CD53P19397 219 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 RBM34P42696 430 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 YAP1P46937 504 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 UBE2NP61088 152 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 ROR2Q01974 943 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 LGALS3BPQ08380 585 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 ZNF74Q16587 644 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 IFI44LQ53G44 452 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 GLYATQ6IB77 296 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 CBLL1Q75N03 491 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 PXKQ7Z7A4 578 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 VTCN1Q7Z7D3 282 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 TSPYL5Q86VY4 417 aaPredicted RBP15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 NKAIN4Q8IVV8 208 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 PIAS4Q8N2W9 510 aaPredicted RBP15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 RNF148Q8N7C7 305 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 TMEM239Q8WW34 195 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 GEMIN6Q8WXD5 167 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 ALPK1Q96QP1 1244 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 PRSS27Q9BQR3 290 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 EMC6Q9BV81 110 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 B3GAT2Q9NPZ5 323 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 SLC17A5Q9NRA2 495 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 NDE1Q9NXR1 346 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 ABCD2Q9UBJ2 740 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 EGFL7Q9UHF1 273 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 ZNF229Q9UJW7 825 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 MED31Q9Y3C7 131 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 MAGED1Q9Y5V3 778 aaPredicted RBP15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 SLC25A15Q9Y619 301 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 SPG11Q96JI7 2443 aa15.88■□□□□ 0.13
PDLIM2-215ENST00000456545 BLOC1S5-TXNDC5H3BN57 136 aa15.87■□□□□ 0.13
PDLIM2-215ENST00000456545 HS3ST1O14792 307 aa15.87■□□□□ 0.13
PDLIM2-215ENST00000456545 HPRP00739 348 aa15.87■□□□□ 0.13
PDLIM2-215ENST00000456545 MT-ND1P03886 318 aa15.87■□□□□ 0.13
PDLIM2-215ENST00000456545 HLA-DOBP13765 273 aa15.87■□□□□ 0.13
PDLIM2-215ENST00000456545 PTAFRP25105 342 aa15.87■□□□□ 0.13
PDLIM2-215ENST00000456545 MNAT1P51948 309 aa15.87■□□□□ 0.13
PDLIM2-215ENST00000456545 C16orf89Q6UX73 402 aa15.87■□□□□ 0.13
PDLIM2-215ENST00000456545 SPNS3Q6ZMD2 512 aa15.87■□□□□ 0.13
PDLIM2-215ENST00000456545 NANOGNBQ7Z5D8 188 aa15.87■□□□□ 0.13
PDLIM2-215ENST00000456545 CYP4Z1Q86W10 505 aa15.87■□□□□ 0.13
PDLIM2-215ENST00000456545 ANKS4BQ8N8V4 417 aa15.87■□□□□ 0.13
PDLIM2-215ENST00000456545 CCDC197Q8NCU1 140 aa15.87■□□□□ 0.13
PDLIM2-215ENST00000456545 OR6N1Q8NGY5 312 aa15.87■□□□□ 0.13
PDLIM2-215ENST00000456545 TMEM255BQ8WV15 326 aa15.87■□□□□ 0.13
PDLIM2-215ENST00000456545 SGTBQ96EQ0 304 aa15.87■□□□□ 0.13
PDLIM2-215ENST00000456545 PRRC1Q96M27 445 aa15.87■□□□□ 0.13
PDLIM2-215ENST00000456545 OR2M2Q96R28 347 aa15.87■□□□□ 0.13
PDLIM2-215ENST00000456545 TMEM204Q9BSN7 226 aa15.87■□□□□ 0.13
PDLIM2-215ENST00000456545 AMBRA1Q9C0C7 1298 aa15.87■□□□□ 0.13
PDLIM2-215ENST00000456545 ARL8BQ9NVJ2 186 aa15.87■□□□□ 0.13
PDLIM2-215ENST00000456545 MED29Q9NX70 200 aa15.87■□□□□ 0.13
PDLIM2-215ENST00000456545 POU2F3Q9UKI9 436 aa15.87■□□□□ 0.13
PDLIM2-215ENST00000456545 MGAT4BQ9UQ53 548 aa15.87■□□□□ 0.13
PDLIM2-215ENST00000456545 AKAP6Q13023 2319 aa15.86■□□□□ 0.13
PDLIM2-215ENST00000456545 SLC35F4A4IF30 521 aa15.86■□□□□ 0.13
PDLIM2-215ENST00000456545 M0R3G1 203 aa15.86■□□□□ 0.13
PDLIM2-215ENST00000456545 ABCD4O14678 606 aa15.86■□□□□ 0.13
PDLIM2-215ENST00000456545 TRAF3IP2O43734 574 aaPredicted RBP15.86■□□□□ 0.13
PDLIM2-215ENST00000456545 ZNF432O94892 652 aa15.86■□□□□ 0.13
PDLIM2-215ENST00000456545 FUT1P19526 365 aa15.86■□□□□ 0.13
PDLIM2-215ENST00000456545 TCN1P20061 433 aaPredicted RBP15.86■□□□□ 0.13
PDLIM2-215ENST00000456545 SH3BGRP55822 239 aaPredicted RBP15.86■□□□□ 0.13
PDLIM2-215ENST00000456545 TESK1Q15569 626 aa15.86■□□□□ 0.13
PDLIM2-215ENST00000456545 HIKESHIQ53FT3 197 aa15.86■□□□□ 0.13
PDLIM2-215ENST00000456545 C1QTNF12Q5T7M4 302 aa15.86■□□□□ 0.13
PDLIM2-215ENST00000456545 ADAM5Q6NVV9 412 aa15.86■□□□□ 0.13
PDLIM2-215ENST00000456545 SLC22A25Q6T423 547 aa15.86■□□□□ 0.13
PDLIM2-215ENST00000456545 RRM2BQ7LG56 351 aa15.86■□□□□ 0.13
PDLIM2-215ENST00000456545 LRRC17Q8N6Y2 441 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms