RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 KDM4EB2RXH2 506 aaPredicted RBP13.05□□□□□ -0.32
SHANK2-210ENST00000449116 MCIDASD6RGH6 385 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 PRB1P04280 392 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 F13BP05160 661 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 POU1F1P28069 291 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 SLC16A1P53985 500 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 CRISP1P54107 249 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 POU3F1Q03052 451 aaPredicted RBP13.05□□□□□ -0.32
SHANK2-210ENST00000449116 TLE1Q04724 770 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 RASGEF1BQ0VAM2 473 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 C1DQ13901 141 aaKnown RBP13.05□□□□□ -0.32
SHANK2-210ENST00000449116 SLC17A1Q14916 467 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 PDK3Q15120 406 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 RNPS1Q15287 305 aaKnown RBP13.05□□□□□ -0.32
SHANK2-210ENST00000449116 CLEC12AQ5QGZ9 265 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 RTL6Q6ICC9 239 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 RPTNQ6XPR3 784 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 DPY19L2P2Q6ZN68 376 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 UEVLDQ8IX04 471 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 MCEMP1Q8IX19 187 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 ZNF843Q8N446 348 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 OR9K2Q8NGE7 335 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 OR8D4Q8NGM9 314 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 ABHD3Q8WU67 409 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 TSSK6Q9BXA6 273 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 RIBC2Q9H4K1 309 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 INIPQ9NRY2 104 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 KLHL9Q9P2J3 617 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 IL20RAQ9UHF4 553 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 TINAGQ9UJW2 476 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 FAM215AQ9Y5M1 114 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 NOX1Q9Y5S8 564 aa13.05□□□□□ -0.32
SHANK2-210ENST00000449116 PRRC2CQ9Y520 2896 aaKnown RBP13.05□□□□□ -0.32
SHANK2-210ENST00000449116 GTF3C1Q12789 2109 aa13.04□□□□□ -0.32
SHANK2-210ENST00000449116 A0A1W2PRG6 482 aa13.04□□□□□ -0.32
SHANK2-210ENST00000449116 MBD3L4A6NDZ8 208 aaPredicted RBP13.04□□□□□ -0.32
SHANK2-210ENST00000449116 MBD3L3A6NE82 208 aaPredicted RBP13.04□□□□□ -0.32
SHANK2-210ENST00000449116 MBD3L5A6NJ08 208 aaPredicted RBP13.04□□□□□ -0.32
SHANK2-210ENST00000449116 EIF4E1BA6NMX2 242 aaKnown RBP13.04□□□□□ -0.32
SHANK2-210ENST00000449116 ZNF716A6NP11 495 aa13.04□□□□□ -0.32
SHANK2-210ENST00000449116 H0YJX3 145 aa13.04□□□□□ -0.32
SHANK2-210ENST00000449116 DLGAP1O14490 977 aa13.04□□□□□ -0.32
SHANK2-210ENST00000449116 SERPINI2O75830 405 aa13.04□□□□□ -0.32
SHANK2-210ENST00000449116 SNAP29O95721 258 aa13.04□□□□□ -0.32
SHANK2-210ENST00000449116 PLGP00747 810 aaPredicted RBP13.04□□□□□ -0.32
SHANK2-210ENST00000449116 CD14P08571 375 aa13.04□□□□□ -0.32
SHANK2-210ENST00000449116 HLA-DOBP13765 273 aa13.04□□□□□ -0.32
SHANK2-210ENST00000449116 ZNF43P17038 809 aa13.04□□□□□ -0.32
SHANK2-210ENST00000449116 CASP6P55212 293 aa13.04□□□□□ -0.32
SHANK2-210ENST00000449116 CTXN1P60606 82 aa13.04□□□□□ -0.32
SHANK2-210ENST00000449116 NPRL3Q12980 569 aa13.04□□□□□ -0.32
SHANK2-210ENST00000449116 ZIK1Q3SY52 487 aaPredicted RBP13.04□□□□□ -0.32
SHANK2-210ENST00000449116 B3GNT6Q6ZMB0 384 aa13.04□□□□□ -0.32
SHANK2-210ENST00000449116 IGFN1Q86VF2 1251 aa13.04□□□□□ -0.32
SHANK2-210ENST00000449116 OR2T33Q8NG76 320 aa13.04□□□□□ -0.32
SHANK2-210ENST00000449116 MBD3L2Q8NHZ7 208 aaPredicted RBP13.04□□□□□ -0.32
SHANK2-210ENST00000449116 TM9SF2Q99805 663 aa13.04□□□□□ -0.32
SHANK2-210ENST00000449116 IFT27Q9BW83 186 aa13.04□□□□□ -0.32
SHANK2-210ENST00000449116 POLDIP3Q9BY77 421 aaKnown RBP13.04□□□□□ -0.32
SHANK2-210ENST00000449116 ENKD1Q9H0I2 346 aa13.04□□□□□ -0.32
SHANK2-210ENST00000449116 TOR3AQ9H497 397 aa13.04□□□□□ -0.32
SHANK2-210ENST00000449116 RNF122Q9H9V4 155 aa13.04□□□□□ -0.32
SHANK2-210ENST00000449116 GP6Q9HCN6 339 aa13.04□□□□□ -0.32
SHANK2-210ENST00000449116 NRIP3Q9NQ35 241 aa13.04□□□□□ -0.32
SHANK2-210ENST00000449116 GLRX2Q9NS18 164 aa13.04□□□□□ -0.32
SHANK2-210ENST00000449116 KIAA1549Q9HCM3 1950 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 IGKV3D-15A0A087WSY6 115 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 TRGV8A0A0C4DH27 118 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 NPIPB13A6NJU9 1138 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 NPIPB4C9JG80 1138 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 BHLHE40O14503 412 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 GPR171O14626 319 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 TRAF3IP2O43734 574 aaPredicted RBP13.03□□□□□ -0.32
SHANK2-210ENST00000449116 C1QL1O75973 258 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 PPP1R3DO95685 299 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 IGHMP01871 453 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 APEHP13798 732 aaKnown RBP13.03□□□□□ -0.32
SHANK2-210ENST00000449116 POLR2IP36954 125 aaKnown RBP13.03□□□□□ -0.32
SHANK2-210ENST00000449116 RPS6KA3P51812 740 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 AQP4P55087 323 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 ERVK-25P63136 954 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 GINS1Q14691 196 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 PTGES3Q15185 160 aaKnown RBP13.03□□□□□ -0.32
SHANK2-210ENST00000449116 EEF1A1P5Q5VTE0 462 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 OR2A2Q6IF42 318 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 SLC27A4Q6P1M0 643 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 SEM1Q6ZVN7 128 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 CREB3L2Q70SY1 520 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 SLC35D2Q76EJ3 337 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 C9orf106Q8NAJ2 232 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 GALNT11Q8NCW6 608 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 GMPPAQ96IJ6 420 aaPredicted RBP13.03□□□□□ -0.32
SHANK2-210ENST00000449116 ZNF570Q96NI8 536 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 MBOAT4Q96T53 435 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 KATNB1Q9BVA0 655 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 TXNIPQ9H3M7 391 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 BCO1Q9HAY6 547 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 SLC25A19Q9HC21 320 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 EMC3Q9P0I2 261 aa13.03□□□□□ -0.32
SHANK2-210ENST00000449116 SH3BGRL2Q9UJC5 107 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms