RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 SCAMP2O15127 329 aaKnown RBP3.13□□□□□ -1.91
PMS1-216ENST00000447734 GPAA1O43292 621 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 SLC19A2O60779 497 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 FGGP02679 453 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 SERPINB2P05120 415 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 H2AFZP0C0S5 128 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 NEFHP12036 1026 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 TNFSF9P41273 254 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 CRATP43155 626 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 GSSP48637 474 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 RIDAP52758 137 aaKnown RBP3.13□□□□□ -1.91
PMS1-216ENST00000447734 GPX6P59796 221 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 SKP1P63208 163 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 MRPS11P82912 194 aaKnown RBP3.13□□□□□ -1.91
PMS1-216ENST00000447734 FKBP3Q00688 224 aaKnown RBP3.13□□□□□ -1.91
PMS1-216ENST00000447734 TLE4Q04727 773 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 CCDC173Q0VFZ6 552 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 STX3Q13277 289 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 PSG3Q16557 428 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 OR2G6Q5TZ20 316 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 PWWP2BQ6NUJ5 590 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 MBOAT1Q6ZNC8 495 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 Q6ZRP5 223 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 C9orf47Q6ZRZ4 202 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 CMC1Q7Z7K0 106 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 ZNF547Q8IVP9 402 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 MCOLN2Q8IZK6 566 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 SVOPLQ8N434 492 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 OR56B4Q8NH76 319 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 ZNF519Q8TB69 540 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 ZNF524Q96C55 264 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 ECHDC3Q96DC8 303 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 RNF170Q96K19 258 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 ZNF396Q96N95 335 aaPredicted RBP3.13□□□□□ -1.91
PMS1-216ENST00000447734 FAM210AQ96ND0 272 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 MS4A4EQ96PG1 132 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 MCHR1Q99705 422 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 CHID1Q9BWS9 393 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 HCAR1Q9BXC0 346 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 ZYG11BQ9C0D3 744 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 HDHD2Q9H0R4 259 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 CAB39LQ9H9S4 337 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 NTN4Q9HB63 628 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 HRASLS2Q9NWW9 162 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 B3GNT2Q9NY97 397 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 WWOXQ9NZC7 414 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 RIMS3Q9UJD0 308 aa3.13□□□□□ -1.91
PMS1-216ENST00000447734 FAM172BPA6NC97 362 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 GMDSO60547 372 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 ENTPD5O75356 428 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 NDUFS6O75380 124 aaKnown RBP3.12□□□□□ -1.91
PMS1-216ENST00000447734 EEDO75530 441 aaKnown RBP3.12□□□□□ -1.91
PMS1-216ENST00000447734 CRTAPO75718 401 aaPredicted RBP3.12□□□□□ -1.91
PMS1-216ENST00000447734 KLHL2O95198 593 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 CD160O95971 181 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 NPR2P20594 1047 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 SLC2A5P22732 501 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 UGT1A3P35503 534 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 PTGDSP41222 190 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 ARHGDIBP52566 201 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 PLTPP55058 493 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 UCNP55089 124 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 NDUFV3P56181 108 aaKnown RBP3.12□□□□□ -1.91
PMS1-216ENST00000447734 RPS15AP62244 130 aaKnown RBP3.12□□□□□ -1.91
PMS1-216ENST00000447734 UBE2IP63279 158 aaKnown RBP3.12□□□□□ -1.91
PMS1-216ENST00000447734 IRX3P78415 501 aaPredicted RBP3.12□□□□□ -1.91
PMS1-216ENST00000447734 SLC10A7Q0GE19 358 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 ILF3Q12906 894 aaKnown RBP eCLIP3.12□□□□□ -1.91
PMS1-216ENST00000447734 ORC2Q13416 577 aaPredicted RBP3.12□□□□□ -1.91
PMS1-216ENST00000447734 GABRA6Q16445 453 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 ZNF470Q6ECI4 717 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 FAM53AQ6NSI3 398 aaPredicted RBP3.12□□□□□ -1.91
PMS1-216ENST00000447734 SPSB3Q6PJ21 355 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 SLC35D2Q76EJ3 337 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 ARCQ7LC44 396 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 SLC26A11Q86WA9 606 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 PLA2G4DQ86XP0 818 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 METTL4Q8N3J2 472 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 C17orf78Q8N4C9 275 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 RFLNBQ8N5W9 214 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 OR2G2Q8NGZ5 317 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 C11orf45Q8TAV5 145 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 MRGPRDQ8TDS7 321 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 FGF11Q92914 225 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 PSMG2Q969U7 264 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 SORT1Q99523 831 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 LGMNQ99538 433 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 SH3GL1Q99961 368 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 MRPL45Q9BRJ2 306 aaKnown RBP3.12□□□□□ -1.91
PMS1-216ENST00000447734 FAIM2Q9BWQ8 316 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 MAP1LC3CQ9BXW4 147 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 NMUR2Q9GZQ4 415 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 KIR3DX1Q9H7L2 352 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 ANKHQ9HCJ1 492 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 AGPAT4Q9NRZ5 378 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 CCDC59Q9P031 241 aaKnown RBP3.12□□□□□ -1.91
PMS1-216ENST00000447734 KIF25Q9UIL4 384 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 SLC22A14Q9Y267 594 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 POFUT2Q9Y2G5 429 aa3.12□□□□□ -1.91
PMS1-216ENST00000447734 YARS2Q9Y2Z4 477 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms