RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 ZNF23P17027 643 aa12.53□□□□□ -0.4
SREBF1-207ENST00000447641 RHCEP18577 417 aa12.53□□□□□ -0.4
SREBF1-207ENST00000447641 CDH2P19022 906 aaPredicted RBP12.53□□□□□ -0.4
SREBF1-207ENST00000447641 SORDQ00796 357 aa12.53□□□□□ -0.4
SREBF1-207ENST00000447641 RFX4Q33E94 735 aa12.53□□□□□ -0.4
SREBF1-207ENST00000447641 IQCCQ4KMZ1 466 aa12.53□□□□□ -0.4
SREBF1-207ENST00000447641 OTUD3Q5T2D3 398 aaPredicted RBP12.53□□□□□ -0.4
SREBF1-207ENST00000447641 OR2T5Q6IEZ7 315 aa12.53□□□□□ -0.4
SREBF1-207ENST00000447641 TFAP2EQ6VUC0 442 aa12.53□□□□□ -0.4
SREBF1-207ENST00000447641 DEF8Q6ZN54 512 aa12.53□□□□□ -0.4
SREBF1-207ENST00000447641 KIF18BQ86Y91 864 aa12.53□□□□□ -0.4
SREBF1-207ENST00000447641 LINC00471Q8N535 108 aa12.53□□□□□ -0.4
SREBF1-207ENST00000447641 FAM86B1Q8N7N1 296 aa12.53□□□□□ -0.4
SREBF1-207ENST00000447641 ZIC4Q8N9L1 334 aa12.53□□□□□ -0.4
SREBF1-207ENST00000447641 PIK3C3Q8NEB9 887 aa12.53□□□□□ -0.4
SREBF1-207ENST00000447641 OR2T29Q8NH02 315 aa12.53□□□□□ -0.4
SREBF1-207ENST00000447641 RDH12Q96NR8 316 aa12.53□□□□□ -0.4
SREBF1-207ENST00000447641 EPYCQ99645 322 aa12.53□□□□□ -0.4
SREBF1-207ENST00000447641 TAPBPLQ9BX59 468 aa12.53□□□□□ -0.4
SREBF1-207ENST00000447641 EMC3Q9P0I2 261 aa12.53□□□□□ -0.4
SREBF1-207ENST00000447641 ENOPH1Q9UHY7 261 aa12.53□□□□□ -0.4
SREBF1-207ENST00000447641 ANKHD1Q8IWZ3 2542 aaKnown RBP12.53□□□□□ -0.4
SREBF1-207ENST00000447641 G3V2T6 193 aa12.52□□□□□ -0.41
SREBF1-207ENST00000447641 VAMP5O95183 116 aa12.52□□□□□ -0.41
SREBF1-207ENST00000447641 HPRP00739 348 aa12.52□□□□□ -0.41
SREBF1-207ENST00000447641 IGF2P01344 180 aa12.52□□□□□ -0.41
SREBF1-207ENST00000447641 HOXB4P17483 251 aaPredicted RBP12.52□□□□□ -0.41
SREBF1-207ENST00000447641 FUT4P22083 530 aa12.52□□□□□ -0.41
SREBF1-207ENST00000447641 DNAJA1P31689 397 aaKnown RBP12.52□□□□□ -0.41
SREBF1-207ENST00000447641 UQCRC1P31930 480 aa12.52□□□□□ -0.41
SREBF1-207ENST00000447641 CD79BP40259 229 aa12.52□□□□□ -0.41
SREBF1-207ENST00000447641 PEX19P40855 299 aa12.52□□□□□ -0.41
SREBF1-207ENST00000447641 RBM34P42696 430 aaKnown RBP12.52□□□□□ -0.41
SREBF1-207ENST00000447641 OR3A2P47893 321 aa12.52□□□□□ -0.41
SREBF1-207ENST00000447641 TAS2R41P59536 307 aa12.52□□□□□ -0.41
SREBF1-207ENST00000447641 MFSD13AQ14CX5 517 aa12.52□□□□□ -0.41
SREBF1-207ENST00000447641 POU4F3Q15319 338 aa12.52□□□□□ -0.41
SREBF1-207ENST00000447641 NHLRC1Q6VVB1 395 aa12.52□□□□□ -0.41
SREBF1-207ENST00000447641 MEX3BQ6ZN04 569 aaKnown RBP12.52□□□□□ -0.41
SREBF1-207ENST00000447641 GALNT5Q7Z7M9 940 aa12.52□□□□□ -0.41
SREBF1-207ENST00000447641 NKAIN4Q8IVV8 208 aa12.52□□□□□ -0.41
SREBF1-207ENST00000447641 ADPRHL1Q8NDY3 354 aa12.52□□□□□ -0.41
SREBF1-207ENST00000447641 OR5K1Q8NHB7 308 aa12.52□□□□□ -0.41
SREBF1-207ENST00000447641 ZNF775Q96BV0 537 aaPredicted RBP12.52□□□□□ -0.41
SREBF1-207ENST00000447641 PRRC1Q96M27 445 aa12.52□□□□□ -0.41
SREBF1-207ENST00000447641 MOGAT1Q96PD6 335 aa12.52□□□□□ -0.41
SREBF1-207ENST00000447641 RBM4BQ9BQ04 359 aaKnown RBP12.52□□□□□ -0.41
SREBF1-207ENST00000447641 RBM4Q9BWF3 364 aaKnown RBP12.52□□□□□ -0.41
SREBF1-207ENST00000447641 MEPEQ9NQ76 525 aaPredicted RBP12.52□□□□□ -0.41
SREBF1-207ENST00000447641 MAN2C1Q9NTJ4 1040 aa12.52□□□□□ -0.41
SREBF1-207ENST00000447641 RASD1Q9Y272 281 aa12.52□□□□□ -0.41
SREBF1-207ENST00000447641 B3GALT5Q9Y2C3 310 aa12.52□□□□□ -0.41
SREBF1-207ENST00000447641 FLVCR1Q9Y5Y0 555 aa12.52□□□□□ -0.41
SREBF1-207ENST00000447641 ENPP4Q9Y6X5 453 aa12.52□□□□□ -0.41
SREBF1-207ENST00000447641 SPG11Q96JI7 2443 aa12.52□□□□□ -0.41
SREBF1-207ENST00000447641 CNOT4O95628 575 aaKnown RBP12.51□□□□□ -0.41
SREBF1-207ENST00000447641 MT-ATP6P00846 226 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 EDNRAP25101 427 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 PEX2P28328 305 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 GRPRP30550 384 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 TLE4Q04727 773 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 FAM27E3Q08E93 113 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 ST3GAL3Q11203 375 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 SHQ1Q6PI26 577 aaKnown RBP12.51□□□□□ -0.41
SREBF1-207ENST00000447641 TTC33Q6PID6 262 aaPredicted RBP12.51□□□□□ -0.41
SREBF1-207ENST00000447641 IZUMO2Q6UXV1 221 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 BEND4Q6ZU67 534 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 H1FNTQ75WM6 255 aaPredicted RBP12.51□□□□□ -0.41
SREBF1-207ENST00000447641 AMIGO2Q86SJ2 522 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 OFCC1Q8IZS5 231 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 GABRG1Q8N1C3 465 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 SCAIQ8N9R8 606 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 OR9K2Q8NGE7 335 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 RNF217Q8TC41 542 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 TMEM45BQ96B21 275 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 SLC25A36Q96CQ1 311 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 HS6ST2Q96MM7 605 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 PIP5K1AQ99755 562 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 SEMA6AQ9H2E6 1030 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 C12orf49Q9H741 205 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 SLC24A3Q9HC58 644 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 FANCFQ9NPI8 374 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 MRPL39Q9NYK5 338 aaKnown RBP12.51□□□□□ -0.41
SREBF1-207ENST00000447641 NDUFAF4Q9P032 175 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 B3GAT1Q9P2W7 334 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 SEC14L4Q9UDX3 406 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 LRRC42Q9Y546 428 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 CORINQ9Y5Q5 1042 aa12.51□□□□□ -0.41
SREBF1-207ENST00000447641 PRRC2AP48634 2157 aaKnown RBP12.5□□□□□ -0.41
SREBF1-207ENST00000447641 ALPK2Q86TB3 2170 aa12.5□□□□□ -0.41
SREBF1-207ENST00000447641 MS4A18H0YCH9 400 aa12.5□□□□□ -0.41
SREBF1-207ENST00000447641 J3KTA2 159 aa12.5□□□□□ -0.41
SREBF1-207ENST00000447641 M0R082 166 aa12.5□□□□□ -0.41
SREBF1-207ENST00000447641 RRM2P31350 389 aa12.5□□□□□ -0.41
SREBF1-207ENST00000447641 UGT2B10P36537 528 aa12.5□□□□□ -0.41
SREBF1-207ENST00000447641 RAD23AP54725 363 aa12.5□□□□□ -0.41
SREBF1-207ENST00000447641 VLDLRP98155 873 aa12.5□□□□□ -0.41
SREBF1-207ENST00000447641 ZNF74Q16587 644 aa12.5□□□□□ -0.41
SREBF1-207ENST00000447641 MS4A18Q3C1V0 323 aa12.5□□□□□ -0.41
SREBF1-207ENST00000447641 TMEM225Q6GV28 225 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms