RNA–Protein interactions for RNA: ENST00000446783.1

CHCHD3P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 3, humanhuman

BASIC

Gene CHCHD3P3, Length 640 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P3-201ENST00000446783 NPR2P20594 1047 aa9.92□□□□□ -0.82
CHCHD3P3-201ENST00000446783 THBS2P35442 1172 aa9.92□□□□□ -0.82
CHCHD3P3-201ENST00000446783 PPOXP50336 477 aa9.92□□□□□ -0.82
CHCHD3P3-201ENST00000446783 CEACAM16Q2WEN9 425 aa9.92□□□□□ -0.82
CHCHD3P3-201ENST00000446783 H1FNTQ75WM6 255 aaPredicted RBP9.92□□□□□ -0.82
CHCHD3P3-201ENST00000446783 SPATA21Q7Z572 469 aa9.92□□□□□ -0.82
CHCHD3P3-201ENST00000446783 NET1Q7Z628 596 aaPredicted RBP9.92□□□□□ -0.82
CHCHD3P3-201ENST00000446783 ZCCHC24Q8N2G6 241 aaKnown RBP9.92□□□□□ -0.82
CHCHD3P3-201ENST00000446783 SVOPLQ8N434 492 aa9.92□□□□□ -0.82
CHCHD3P3-201ENST00000446783 ZNF540Q8NDQ6 660 aa9.92□□□□□ -0.82
CHCHD3P3-201ENST00000446783 ANKK1Q8NFD2 765 aa9.92□□□□□ -0.82
CHCHD3P3-201ENST00000446783 NUP37Q8NFH4 326 aa9.92□□□□□ -0.82
CHCHD3P3-201ENST00000446783 ZNF417Q8TAU3 575 aa9.92□□□□□ -0.82
CHCHD3P3-201ENST00000446783 RNF217Q8TC41 542 aa9.92□□□□□ -0.82
CHCHD3P3-201ENST00000446783 SLC38A4Q969I6 547 aa9.92□□□□□ -0.82
CHCHD3P3-201ENST00000446783 TAAR8Q969N4 342 aa9.92□□□□□ -0.82
CHCHD3P3-201ENST00000446783 SLC35B4Q969S0 331 aa9.92□□□□□ -0.82
CHCHD3P3-201ENST00000446783 ZNF837Q96EG3 531 aaPredicted RBP9.92□□□□□ -0.82
CHCHD3P3-201ENST00000446783 ZNF587Q96SQ5 575 aaPredicted RBP9.92□□□□□ -0.82
CHCHD3P3-201ENST00000446783 DOK1Q99704 481 aa9.92□□□□□ -0.82
CHCHD3P3-201ENST00000446783 BPESC1Q9GZL8 116 aa9.92□□□□□ -0.82
CHCHD3P3-201ENST00000446783 RAD21L1Q9H4I0 556 aa9.92□□□□□ -0.82
CHCHD3P3-201ENST00000446783 CRLF2Q9HC73 371 aa9.92□□□□□ -0.82
CHCHD3P3-201ENST00000446783 NKIRAS1Q9NYS0 192 aa9.92□□□□□ -0.82
CHCHD3P3-201ENST00000446783 B3GAT1Q9P2W7 334 aa9.92□□□□□ -0.82
CHCHD3P3-201ENST00000446783 TRAV36DV7A0A075B6V5 113 aa9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 A0A1B0GWA3 101 aa9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 TMEM129A0AVI4 362 aa9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 LRP5LA4QPB2 252 aa9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 ERCC1P07992 297 aaPredicted RBP9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 BMP2P12643 396 aa9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 DAOP14920 347 aa9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 ETS2P15036 469 aa9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 HNF1AP20823 631 aa9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 GRPRP30550 384 aa9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 ARR3P36575 388 aa9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 CAPZA2P47755 286 aa9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 MAGOHP61326 146 aaKnown RBP9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 NPRL3Q12980 569 aa9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 FADDQ13158 208 aa9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 FAM69AQ5T7M9 428 aa9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 CARD17Q5XLA6 110 aa9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 C6orf89Q6UWU4 347 aa9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 MDP1Q86V88 176 aa9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 MYPOPQ86VE0 399 aaPredicted RBP9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 CCDC36Q8IYA8 594 aa9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 PIK3C3Q8NEB9 887 aa9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 NFKBIDQ8NI38 313 aa9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 NEU4Q8WWR8 484 aaPredicted RBP9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 ANKRD27Q96NW4 1050 aa9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 OR2M2Q96R28 347 aa9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 SOX7Q9BT81 388 aa9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 RSPO3Q9BXY4 272 aaPredicted RBP9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 ZNF442Q9H7R0 627 aa9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 C12orf10Q9HB07 376 aa9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 FBXO9Q9UK97 447 aaPredicted RBP9.91□□□□□ -0.82
CHCHD3P3-201ENST00000446783 IGKV1D-42A0A075B6H8 117 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 IGHV2OR16-5A0A0B4J2B6 119 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 LOC102725191A0A1B0GVB3 256 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 ZNF503-AS2A6NEH8 195 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 MS4A18H0YCH9 400 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 M0R3G1 203 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 AKAP8O43823 692 aaKnown RBP9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 TPST1O60507 370 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 FZD7O75084 574 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 SEC14L2O76054 403 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 NQO1P15559 274 aaKnown RBP9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 HTR2AP28223 471 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 PRKAR1BP31321 381 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 SLC18A1P54219 525 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 STX1BP61266 288 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 DAG1Q14118 895 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 ADRM1Q16186 407 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 CR1LQ2VPA4 569 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 MS4A18Q3C1V0 323 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 ALG10BQ5I7T1 473 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 PHYHD1Q5SRE7 291 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 GCNT6Q5T4J0 391 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 C5orf46Q6UWT4 87 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 COMTD1Q86VU5 262 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 UEVLDQ8IX04 471 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 GOLGA6L1Q8N7Z2 621 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 LSMEM1Q8N8F7 131 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 IL17RDQ8NFM7 739 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 DNAJA4Q8WW22 397 aaPredicted RBP9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 EMC6Q9BV81 110 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 C19orf24Q9BVV8 132 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 DYNLRB1Q9NP97 96 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 SLC25A37Q9NYZ2 338 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 USP22Q9UPT9 525 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 USH1CQ9Y6N9 552 aa9.9□□□□□ -0.82
CHCHD3P3-201ENST00000446783 ZNF99A8MXY4 864 aaPredicted RBP9.89□□□□□ -0.83
CHCHD3P3-201ENST00000446783 TRAF3IP2O43734 574 aaPredicted RBP9.89□□□□□ -0.83
CHCHD3P3-201ENST00000446783 LILRA1O75019 489 aa9.89□□□□□ -0.83
CHCHD3P3-201ENST00000446783 HPRP00739 348 aa9.89□□□□□ -0.83
CHCHD3P3-201ENST00000446783 HLA-HP01893 362 aa9.89□□□□□ -0.83
CHCHD3P3-201ENST00000446783 ADRA2AP08913 450 aa9.89□□□□□ -0.83
CHCHD3P3-201ENST00000446783 ARAFP10398 606 aa9.89□□□□□ -0.83
CHCHD3P3-201ENST00000446783 CD79AP11912 226 aa9.89□□□□□ -0.83
CHCHD3P3-201ENST00000446783 HLA-DOBP13765 273 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms