RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.92□□□□□ -0.34
LIMD1-202ENST00000440097 AADACL4Q5VUY2 407 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 LANCL3Q6ZV70 420 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 KRT74Q7RTS7 529 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 GPAT4Q86UL3 456 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 CYB561A3Q8NBI2 242 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 HSD17B8Q92506 261 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 LRRN3Q9H3W5 708 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 EVA1AQ9H8M9 152 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 TNFRSF10DQ9UBN6 386 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 MRTO4Q9UKD2 239 aaKnown RBP12.92□□□□□ -0.34
LIMD1-202ENST00000440097 SLC35A3Q9Y2D2 325 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 TECTAO75443 2155 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 HEATR5AQ86XA9 2040 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 A0A1B0GTQ1 180 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 RIIAD1A6NNX1 92 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 PRR23D1E9PI22 279 aaPredicted RBP12.92□□□□□ -0.34
LIMD1-202ENST00000440097 SERPINI2O75830 405 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 UTS2O95399 124 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 PRR23D2P0DMB1 279 aaPredicted RBP12.92□□□□□ -0.34
LIMD1-202ENST00000440097 TBXA2RP21731 343 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 SDHBP21912 280 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 GALNSP34059 522 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 SLC1A3P43003 542 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 CCL7P80098 99 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 FOXK2Q01167 660 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 HSF2Q03933 536 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 CD226Q15762 336 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 ZNF574Q6ZN55 896 aaPredicted RBP12.92□□□□□ -0.34
LIMD1-202ENST00000440097 RTL4Q6ZR62 310 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 NR2C2APQ86WQ0 139 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 CMIPQ8IY22 773 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 ZNF563Q8TA94 476 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 MS4A3Q96HJ5 214 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 NUDT9Q9BW91 350 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 PILRBQ9UKJ0 227 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 RIF1Q5UIP0 2472 aaKnown RBP12.92□□□□□ -0.34
LIMD1-202ENST00000440097 IGKV3D-11A0A0A0MRZ8 115 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 IGHV3-20A0A0C4DH32 117 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 TCRBV16S1A1N1A0A5B0 115 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 C19orf67A6NJJ6 358 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 EFCAB7A8K855 629 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 BHLHE40O14503 412 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 NUDT14O95848 222 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 HTR1FP30939 366 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 RPL4P36578 427 aaKnown RBP12.92□□□□□ -0.34
LIMD1-202ENST00000440097 GPR143P51810 404 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 EFNA3P52797 238 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 ZSWIM7Q19AV6 140 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 ZNF791Q3KP31 576 aaPredicted RBP12.92□□□□□ -0.34
LIMD1-202ENST00000440097 CD276Q5ZPR3 534 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 CBLN3Q6UW01 205 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 SLC29A4Q7RTT9 530 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 ADGRG3Q86Y34 549 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 SAP25Q8TEE9 199 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 ZNF721Q8TF20 911 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 RBPMSQ93062 196 aaKnown RBP12.92□□□□□ -0.34
LIMD1-202ENST00000440097 IER2Q9BTL4 223 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 PTTG3PQ9NZH4 202 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 CCDC163A0A0D9SF12 145 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 TEX13CA0A0J9YWL9 993 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 ELOA3DA6NLF2 546 aaPredicted RBP12.91□□□□□ -0.34
LIMD1-202ENST00000440097 DDAH2O95865 285 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 EIF4EP06730 217 aaKnown RBP12.91□□□□□ -0.34
LIMD1-202ENST00000440097 ICAM2P13598 275 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 AHCYP23526 432 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 CFL1P23528 166 aaKnown RBP12.91□□□□□ -0.34
LIMD1-202ENST00000440097 IL32P24001 234 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 ITPKBP27987 946 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 RBM34P42696 430 aaKnown RBP12.91□□□□□ -0.34
LIMD1-202ENST00000440097 RAB14P61106 215 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 ELOA3BQ3SY89 546 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 GXYLT1Q4G148 440 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 KLHL26Q53HC5 615 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 PHF19Q5T6S3 580 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 POMZP3Q6PJE2 187 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 GID4Q8IVV7 300 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 LNX2Q8N448 690 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 ZBTB44Q8NCP5 570 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 ELOA3Q8NG57 546 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 ART5Q96L15 291 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 PPA2Q9H2U2 334 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 SRPK3Q9UPE1 567 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 PATE3B3GLJ2 98 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 ZNF3P17036 446 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 ACY1Q03154 408 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 PUDPQ08623 228 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 PLCXD2Q0VAA5 305 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 CAMK2DQ13557 499 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 VASNQ6EMK4 673 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 TMEM81Q6P7N7 255 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 CHMP1BQ7LBR1 199 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 PIAS4Q8N2W9 510 aaPredicted RBP12.91□□□□□ -0.34
LIMD1-202ENST00000440097 OR5M3Q8NGP4 307 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 STT3BQ8TCJ2 826 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 NXPE2Q96DL1 559 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 ERMAPQ96PL5 475 aaPredicted RBP12.91□□□□□ -0.34
LIMD1-202ENST00000440097 HCAR1Q9BXC0 346 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 DPAGT1Q9H3H5 408 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 CYSLTR2Q9NS75 346 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms