RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 GRK6P43250 576 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 RAD52P43351 418 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 GPR3P46089 330 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 ZNF141Q15928 474 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 CLPPQ16740 277 aaPredicted RBP12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 TMEM69Q5SWH9 247 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 C19orf47Q8N9M1 422 aaKnown RBP12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 DDOQ99489 341 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 WDR76Q9H967 626 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 PNO1Q9NRX1 252 aaKnown RBP12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 OR5V1Q9UGF6 321 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 CLDN16Q9Y5I7 305 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 V9GY05 133 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 MEIS3P1A6NDR6 274 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 ICMTO60725 284 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 SLC22A5O76082 557 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 MPC2O95563 127 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 IGHV4-34P06331 123 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 ADRA2CP18825 462 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 CDK2P24941 298 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 ANGPT1Q15389 498 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 LRRC69Q6ZNQ3 347 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 DPY19L4Q7Z388 723 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 TMPRSS12Q86WS5 348 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 OR56B4Q8NH76 319 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 THEM6Q8WUY1 208 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 RNF166Q96A37 237 aaPredicted RBP12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 KTI12Q96EK9 354 aaPredicted RBP12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 GPR137Q96N19 417 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 SEMA6CQ9H3T2 930 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 KCNK15Q9H427 330 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 HEXA-AS1Q9H8Q6 139 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 TCF7L1Q9HCS4 588 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 FRRS1LQ9P0K9 344 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 CLEC1BQ9P126 229 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 GTF2A1LQ9UNN4 478 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 FKBP7Q9Y680 259 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 AIPO00170 330 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 KHNYNO15037 678 aaKnown RBP12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 PRAMEF2O60811 474 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 CTNSO60931 367 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 CRYZL1O95825 349 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 RAF1P04049 648 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 DPP4P27487 766 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 CENPAP49450 140 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 OC90Q02509 493 aaPredicted RBP12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 LTBQ06643 244 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 GGTLC2Q14390 218 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 ALG10Q5BKT4 473 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 PRAMEF17Q5VTA0 474 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 C1QL3Q5VWW1 255 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 SLC22A10Q63ZE4 541 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 PRSS58Q8IYP2 241 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 UXS1Q8NBZ7 420 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 OR6N2Q8NGY6 317 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 ZDHHC1Q8WTX9 485 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 G6PC3Q9BUM1 346 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 RTN4RQ9BZR6 473 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 ZCCHC4Q9H5U6 513 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 PRDM9Q9NQV7 894 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 MRM2Q9UI43 246 aaKnown RBP12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 SCML1Q9UN30 329 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 C11orf98E9PRG8 122 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 CLDN4O14493 209 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 PEX14O75381 377 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 GLCEO94923 617 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 PLGP00747 810 aaPredicted RBP12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 FZD2Q14332 565 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 GRM7Q14831 915 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 YOD1Q5VVQ6 348 aaPredicted RBP12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 STAC2Q6ZMT1 411 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 NLRC3Q7RTR2 1065 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 FTMTQ8N4E7 242 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 ASB12Q8WXK4 309 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 TOE1Q96GM8 510 aaKnown RBP12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 MAP6Q96JE9 813 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 GAL3ST4Q96RP7 486 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 ADOQ96SZ5 270 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 OR8D2Q9GZM6 311 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 POMT2Q9UKY4 750 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 MPDZO75970 2070 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 TRAV8-7A0A075B6U6 113 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 DOK2O60496 412 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 SULT1A3P0DMM9 295 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 SULT1A4P0DMN0 295 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 PSMB1P20618 241 aaKnown RBP12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 MST1P26927 711 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 ADH7P40394 386 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 MANEAQ5SRI9 462 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 PWWP2BQ6NUJ5 590 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 Q6ZS52 159 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 OR6V1Q8N148 313 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 OR52B4Q8NGK2 314 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 OR5AK2Q8NH90 309 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 ATOH1Q92858 354 aaPredicted RBP12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 PPP1R14AQ96A00 147 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 CCDC120Q96HB5 630 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 LPAR4Q99677 370 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 NMNAT2Q9BZQ4 307 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 TWSG1Q9GZX9 223 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms