RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 KDM4EB2RXH2 506 aaPredicted RBP16.36■□□□□ 0.21
HMGN1-206ENST00000431390 MKRN2OSH3BPM6 223 aa16.36■□□□□ 0.21
HMGN1-206ENST00000431390 XPNPEP2O43895 674 aa16.36■□□□□ 0.21
HMGN1-206ENST00000431390 FAM20BO75063 409 aa16.36■□□□□ 0.21
HMGN1-206ENST00000431390 ENTPD6O75354 484 aa16.36■□□□□ 0.21
HMGN1-206ENST00000431390 TXNDC12O95881 172 aa16.36■□□□□ 0.21
HMGN1-206ENST00000431390 MAGEA5P43359 124 aa16.36■□□□□ 0.21
HMGN1-206ENST00000431390 MLLT10P55197 1068 aa16.36■□□□□ 0.21
HMGN1-206ENST00000431390 CTXN1P60606 82 aa16.36■□□□□ 0.21
HMGN1-206ENST00000431390 PPIAP62937 165 aaKnown RBP16.36■□□□□ 0.21
HMGN1-206ENST00000431390 SLC35A1P78382 337 aa16.36■□□□□ 0.21
HMGN1-206ENST00000431390 ZNF239Q16600 458 aaKnown RBP16.36■□□□□ 0.21
HMGN1-206ENST00000431390 SLC35F1Q5T1Q4 408 aa16.36■□□□□ 0.21
HMGN1-206ENST00000431390 FAM122BQ7Z309 247 aa16.36■□□□□ 0.21
HMGN1-206ENST00000431390 FAM109AQ8N4B1 249 aa16.36■□□□□ 0.21
HMGN1-206ENST00000431390 IPCEF1Q8WWN9 437 aaPredicted RBP16.36■□□□□ 0.21
HMGN1-206ENST00000431390 LRR1Q96L50 414 aa16.36■□□□□ 0.21
HMGN1-206ENST00000431390 ACKR4Q9NPB9 350 aa16.36■□□□□ 0.21
HMGN1-206ENST00000431390 INIPQ9NRY2 104 aa16.36■□□□□ 0.21
HMGN1-206ENST00000431390 SNTNA6NMZ2 147 aa16.35■□□□□ 0.21
HMGN1-206ENST00000431390 M0R3G1 203 aa16.35■□□□□ 0.21
HMGN1-206ENST00000431390 SULT2B1O00204 365 aa16.35■□□□□ 0.21
HMGN1-206ENST00000431390 RNF13O43567 381 aa16.35■□□□□ 0.21
HMGN1-206ENST00000431390 SLC2A10O95528 541 aa16.35■□□□□ 0.21
HMGN1-206ENST00000431390 OPN1LWP04000 364 aa16.35■□□□□ 0.21
HMGN1-206ENST00000431390 SMIM18P0DKX4 95 aa16.35■□□□□ 0.21
HMGN1-206ENST00000431390 ZNF3P17036 446 aa16.35■□□□□ 0.21
HMGN1-206ENST00000431390 SDHAP31040 664 aa16.35■□□□□ 0.21
HMGN1-206ENST00000431390 DIO1P49895 249 aa16.35■□□□□ 0.21
HMGN1-206ENST00000431390 OR2B6P58173 313 aa16.35■□□□□ 0.21
HMGN1-206ENST00000431390 ERVK-25P63136 954 aa16.35■□□□□ 0.21
HMGN1-206ENST00000431390 CSNK2A1P68400 391 aaPredicted RBP16.35■□□□□ 0.21
HMGN1-206ENST00000431390 SLC35A2P78381 396 aa16.35■□□□□ 0.21
HMGN1-206ENST00000431390 PUDPQ08623 228 aa16.35■□□□□ 0.21
HMGN1-206ENST00000431390 APOFQ13790 326 aa16.35■□□□□ 0.21
HMGN1-206ENST00000431390 EMC4Q5J8M3 183 aa16.35■□□□□ 0.21
HMGN1-206ENST00000431390 ZNF362Q5T0B9 420 aaPredicted RBP16.35■□□□□ 0.21
HMGN1-206ENST00000431390 GPR139Q6DWJ6 353 aa16.35■□□□□ 0.21
HMGN1-206ENST00000431390 TMEM154Q6P9G4 183 aa16.35■□□□□ 0.21
HMGN1-206ENST00000431390 ANKK1Q8NFD2 765 aa16.35■□□□□ 0.21
HMGN1-206ENST00000431390 MRPS26Q9BYN8 205 aaKnown RBP16.35■□□□□ 0.21
HMGN1-206ENST00000431390 DUSP21Q9H596 190 aa16.35■□□□□ 0.21
HMGN1-206ENST00000431390 CCNB1IP1Q9NPC3 277 aa16.35■□□□□ 0.21
HMGN1-206ENST00000431390 DNAJC27Q9NZQ0 273 aa16.35■□□□□ 0.21
HMGN1-206ENST00000431390 GPR52Q9Y2T5 361 aa16.35■□□□□ 0.21
HMGN1-206ENST00000431390 ADAM18Q9Y3Q7 739 aa16.35■□□□□ 0.21
HMGN1-206ENST00000431390 A0A087WXM4 84 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 A0A1W2PNV4 684 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 CLCA1A8K7I4 914 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 PRODHO43272 600 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 DNPH1O43598 174 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 IGHMP01871 453 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 F13BP05160 661 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 EEF1B2P24534 225 aaKnown RBP16.34■□□□□ 0.21
HMGN1-206ENST00000431390 CD97P48960 835 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 TUBA4AP68366 448 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 AADACL4Q5VUY2 407 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 NXNL2Q5VZ03 156 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 ESPNLQ6ZVH7 1005 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 LURAP1LQ8IV03 231 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 ZNF540Q8NDQ6 660 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 SMPDL3BQ92485 455 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 RELTQ969Z4 430 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 ZNF582Q96NG8 517 aaPredicted RBP16.34■□□□□ 0.21
HMGN1-206ENST00000431390 HINT3Q9NQE9 182 aaKnown RBP16.34■□□□□ 0.21
HMGN1-206ENST00000431390 PSORS1C1Q9UIG5 152 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 KIAA1549Q9HCM3 1950 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 NPIPB13A6NJU9 1138 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 TRIM64CA6NLI5 447 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 NPIPB4C9JG80 1138 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 C11orf98E9PRG8 122 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 MS4A18H0YCH9 400 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 EIF1BO60739 113 aaKnown RBP16.34■□□□□ 0.21
HMGN1-206ENST00000431390 MRPS14O60783 128 aaKnown RBP16.34■□□□□ 0.21
HMGN1-206ENST00000431390 AKR7A3O95154 331 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 HIST1H1CP16403 213 aaKnown RBP16.34■□□□□ 0.21
HMGN1-206ENST00000431390 POU3F2P20265 443 aaPredicted RBP16.34■□□□□ 0.21
HMGN1-206ENST00000431390 AHCYP23526 432 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 NUDT6P53370 316 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 BLMHQ13867 455 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 ZNF169Q14929 603 aaPredicted RBP16.34■□□□□ 0.21
HMGN1-206ENST00000431390 SLC10A1Q14973 349 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 MS4A18Q3C1V0 323 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 PAQR6Q6TCH4 344 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 CXXC5Q7LFL8 322 aaKnown RBP16.34■□□□□ 0.21
HMGN1-206ENST00000431390 GGNQ86UU5 652 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 RFKQ969G6 155 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 MFRPQ9BY79 579 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 ZDHHC11Q9H8X9 412 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 FKBP14Q9NWM8 211 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 CNOT2Q9NZN8 540 aaKnown RBP16.34■□□□□ 0.21
HMGN1-206ENST00000431390 GRHPRQ9UBQ7 328 aa16.34■□□□□ 0.21
HMGN1-206ENST00000431390 RPL36Q9Y3U8 105 aaKnown RBP16.34■□□□□ 0.21
HMGN1-206ENST00000431390 A0A0J9YW62 118 aa16.33■□□□□ 0.2
HMGN1-206ENST00000431390 PRR23D1E9PI22 279 aaPredicted RBP16.33■□□□□ 0.2
HMGN1-206ENST00000431390 SEC14L5O43304 696 aa16.33■□□□□ 0.2
HMGN1-206ENST00000431390 CELA3AP09093 270 aa16.33■□□□□ 0.2
HMGN1-206ENST00000431390 PRR23D2P0DMB1 279 aaPredicted RBP16.33■□□□□ 0.2
HMGN1-206ENST00000431390 PIPP12273 146 aaPredicted RBP16.33■□□□□ 0.2
HMGN1-206ENST00000431390 PAICSP22234 425 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms