RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 TSSK6Q9BXA6 273 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 TTTY10Q9BZA0 68 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 ZNF556Q9HAH1 456 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 DNAJC27Q9NZQ0 273 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 A0A087WV48 116 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 ZNF99A8MXY4 864 aaPredicted RBP8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 PYCARD-AS1I3L0S3 204 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 FMO6PO60774 539 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 SULT1C4O75897 302 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 INMTO95050 263 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 SNX4O95219 450 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 STSP08842 583 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 ADORA3P0DMS8 318 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 ZNF24P17028 368 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 SLC6A8P48029 635 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 DIO1P49895 249 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 DSCR4P56555 118 aaPredicted RBP8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 PRKCDQ05655 676 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 RPL18Q07020 188 aaKnown RBP8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 LINC00299Q6ZSB3 139 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 PARP8Q8N3A8 854 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 SYT14Q8NB59 555 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 C7orf57Q8NEG2 295 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 SDR9C7Q8NEX9 313 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 OR9Q1Q8NGQ5 310 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 DNAJA4Q8WW22 397 aaPredicted RBP8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 PMM1Q92871 262 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 DUSP21Q9H596 190 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 LDAHQ9H6V9 325 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 EXO5Q9H790 373 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 TAS2R5Q9NYW4 299 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 CORINQ9Y5Q5 1042 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 NBPF19A0A087WUL8 3843 aa8.54□□□□□ -1.04
HMGCLL1-206ENST00000428842 UNC119BA6NIH7 251 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 MKRN2OSH3BPM6 223 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 TFECO14948 347 aaPredicted RBP8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 CXCL13O43927 109 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 DPM1O60762 260 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 NPIPB7O75200 414 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 GABARAPO95166 117 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 GUSBP08236 651 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 BMP7P18075 431 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 RPL4P36578 427 aaKnown RBP8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 CRISP1P54107 249 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 GFRA1P56159 465 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 SLC35A2P78381 396 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 IL5RAQ01344 420 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 EMX1Q04741 257 aaPredicted RBP8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 CARD17Q5XLA6 110 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 PCSK4Q6UW60 755 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 IGFL2Q6UWQ7 119 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 ZNF620Q6ZNG0 422 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 GGNQ86UU5 652 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 ENTHD1Q8IYW4 607 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 ZADH2Q8N4Q0 377 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 TCEANCQ8N8B7 351 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 ZFP62Q8NB50 900 aaPredicted RBP8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 OR4K13Q8NH42 304 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 ABHD3Q8WU67 409 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 SGTBQ96EQ0 304 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 SCMH1Q96GD3 660 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 TMEM41AQ96HV5 264 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 Q96M85 177 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 KATNB1Q9BVA0 655 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 IFT27Q9BW83 186 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 DGCR6LQ9BY27 220 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 HHATLQ9HCP6 504 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 SDHAF3Q9NRP4 125 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 TAS2R16Q9NYV7 291 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 IER3IP1Q9Y5U9 82 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 SHANK1Q9Y566 2161 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 IGLV3-32A0A0A0MS00 114 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 A0A1B0GTH9 108 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 SH3D21A4FU49 640 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 DCTN6O00399 190 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 TLX2O43763 284 aaPredicted RBP8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 MRPS14O60783 128 aaKnown RBP8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 BGLAPP02818 100 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 PRB1P04280 392 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 PNMTP11086 282 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 OR2B6P58173 313 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 TSPAN31Q12999 210 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 ZNF169Q14929 603 aaPredicted RBP8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 ETFDHQ16134 617 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 C16orf87Q6PH81 154 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 PTCHD4Q6ZW05 846 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 CENPSQ8N2Z9 138 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 APH1BQ8WW43 257 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 YIPF6Q96EC8 236 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 ZNF226Q9NYT6 803 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 WARS2Q9UGM6 360 aaKnown RBP8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 NDRG4Q9ULP0 352 aaKnown RBP8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 RNF6Q9Y252 685 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 ERGIC3Q9Y282 383 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 GMPPBQ9Y5P6 360 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 GCN1Q92616 2671 aaKnown RBP8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 ICE1Q9Y2F5 2266 aa8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 HELZ2Q9BYK8 2649 aaKnown RBP8.53□□□□□ -1.04
HMGCLL1-206ENST00000428842 A8MVM7 634 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms