RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 PYCARD-AS1I3L0S3 204 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 LGALS8O00214 317 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 HCRTR1O43613 425 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 RAD1O60671 282 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 ANXA2P07355 339 aaKnown RBP6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 IFNGR1P15260 489 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 RBM34P42696 430 aaKnown RBP6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 CDKN2AP42771 156 aaKnown RBP6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 MAP2K6P52564 334 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 TAS2R20P59543 309 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 PPP1CAP62136 330 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 STAC2Q6ZMT1 411 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 DPY19L2P2Q6ZN68 376 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 ZNF550Q7Z398 422 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 FAM220AQ7Z4H9 259 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 JAZF1Q86VZ6 243 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 PARGQ86W56 976 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 SLC35F3Q8IY50 421 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 CA13Q8N1Q1 262 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 LSMEM1Q8N8F7 131 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 OR5AK2Q8NH90 309 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 FLVCR1-AS1Q8TAF5 88 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 ANKRD9Q96BM1 317 aaPredicted RBP6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 RPP25Q9BUL9 199 aaKnown RBP6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 ULBP3Q9BZM4 244 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 CD93Q9NPY3 652 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 NPDC1Q9NQX5 325 aaPredicted RBP6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 GTF2A1LQ9UNN4 478 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 NPTNQ9Y639 398 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 RNF215Q9Y6U7 377 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 TP53BP1Q12888 1972 aaPredicted RBP6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 OR5K3A6NET4 321 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 ACOT7O00154 380 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 CDK2AP1O14519 115 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 IFNA16P05015 189 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 UBL4AP11441 157 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 ENPP2Q13822 863 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 PCGF3Q3KNV8 242 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 BPHLQ86WA6 291 aaPredicted RBP6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 ZNF676Q8N7Q3 588 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 FAM71CQ8NEG0 241 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 OR5M1Q8NGP8 315 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 OR8S1Q8NH09 359 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 THEM6Q8WUY1 208 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 CXorf58Q96LI9 332 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 LINC00052Q96N35 136 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 ZNF426Q9BUY5 554 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 ARL6Q9H0F7 186 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 TTYH1Q9H313 450 aaPredicted RBP6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 SDHAF2Q9NX18 166 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 TAS2R5Q9NYW4 299 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 KLHDC2Q9Y2U9 406 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 PLSCR5A0PG75 271 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 ANKRD20A5PA0PJZ0 165 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 UBE2QL1A1L167 161 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 MCRIP1C9JLW8 97 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 H0YC42 278 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 PLRG1O43660 514 aaKnown RBP6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 GALR3O60755 368 aaPredicted RBP6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 RBBP9O75884 186 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 GRK6P43250 576 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 CENPAP49450 140 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 GPR143P51810 404 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 CTXN1P60606 82 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 C11orf88Q6PI97 169 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 MAMSTRQ6ZN01 415 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 OR10AC1Q8NH08 325 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 WDR92Q96MX6 357 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 FOXN4Q96NZ1 517 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 CRISPLD2Q9H0B8 497 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 C12orf4Q9NQ89 552 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 ING1Q9UK53 422 aaPredicted RBP6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 CDV3Q9UKY7 258 aaKnown RBP6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 VCANP13611 3396 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 A0A0A6YYC8 382 aaPredicted RBP6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 hCG_1807616A0A1W2PRN6 198 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 I3L1I5 382 aaPredicted RBP6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 GLCEO94923 617 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 TACSTD2P09758 323 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 ADRA2CP18825 462 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 FCARP24071 287 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 MAP3K8P41279 467 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 RAP2BP61225 183 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 MAT1AQ00266 395 aaKnown RBP6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 TAGLNQ01995 201 aaKnown RBP6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 ILF3Q12906 894 aaKnown RBP eCLIP6.87□□□□□ -1.314e-8■■■■□ 24.7
SMARCC1-202ENST00000425518 TUSC1Q2TAM9 212 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 POMZP3Q6PJE2 187 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 PRSS42Q7Z5A4 293 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 DND1Q8IYX4 353 aaKnown RBP6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 OR6N2Q8NGY6 317 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 HAVCR1Q96D42 359 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 PLEKHA1Q9HB21 404 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 ZC4H2Q9NQZ6 224 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 EMC3Q9P0I2 261 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 ELOA3DA6NLF2 546 aaPredicted RBP6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 SMAD9O15198 467 aaKnown RBP6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 TNFSF14O43557 240 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 GPANK1O95872 356 aa6.87□□□□□ -1.31
SMARCC1-202ENST00000425518 GIPP09681 153 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms