RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 SDR39U1Q9NRG7 319 aaPredicted RBP21.07■□□□□ 0.96
AC005540.1-201ENST00000413911 THAP1Q9NVV9 213 aa21.07■□□□□ 0.96
AC005540.1-201ENST00000413911 IFT52Q9Y366 437 aa21.07■□□□□ 0.96
AC005540.1-201ENST00000413911 IGKV1D-42A0A075B6H8 117 aa21.06■□□□□ 0.96
AC005540.1-201ENST00000413911 SH3PXD2BA1X283 911 aa21.06■□□□□ 0.96
AC005540.1-201ENST00000413911 LYNX1G3V0Z9 82 aa21.06■□□□□ 0.96
AC005540.1-201ENST00000413911 M0R082 166 aa21.06■□□□□ 0.96
AC005540.1-201ENST00000413911 SLC43A1O75387 559 aa21.06■□□□□ 0.96
AC005540.1-201ENST00000413911 LYNX1P0DP58 116 aa21.06■□□□□ 0.96
AC005540.1-201ENST00000413911 HNF1AP20823 631 aa21.06■□□□□ 0.96
AC005540.1-201ENST00000413911 HTR2AP28223 471 aa21.06■□□□□ 0.96
AC005540.1-201ENST00000413911 NPRL3Q12980 569 aa21.06■□□□□ 0.96
AC005540.1-201ENST00000413911 RGNQ15493 299 aa21.06■□□□□ 0.96
AC005540.1-201ENST00000413911 TRIP10Q15642 601 aa21.06■□□□□ 0.96
AC005540.1-201ENST00000413911 HHATQ5VTY9 493 aa21.06■□□□□ 0.96
AC005540.1-201ENST00000413911 C6orf89Q6UWU4 347 aa21.06■□□□□ 0.96
AC005540.1-201ENST00000413911 WDFY1Q8IWB7 410 aa21.06■□□□□ 0.96
AC005540.1-201ENST00000413911 TMEM123Q8N131 208 aa21.06■□□□□ 0.96
AC005540.1-201ENST00000413911 ZNF417Q8TAU3 575 aa21.06■□□□□ 0.96
AC005540.1-201ENST00000413911 ITCHQ96J02 903 aa21.06■□□□□ 0.96
AC005540.1-201ENST00000413911 OR2M2Q96R28 347 aa21.06■□□□□ 0.96
AC005540.1-201ENST00000413911 OR52B2Q96RD2 323 aa21.06■□□□□ 0.96
AC005540.1-201ENST00000413911 ZNF587Q96SQ5 575 aaPredicted RBP21.06■□□□□ 0.96
AC005540.1-201ENST00000413911 PAIP1Q9H074 479 aaKnown RBP21.06■□□□□ 0.96
AC005540.1-201ENST00000413911 NOX3Q9HBY0 568 aa21.06■□□□□ 0.96
AC005540.1-201ENST00000413911 BCL2L10Q9HD36 194 aa21.06■□□□□ 0.96
AC005540.1-201ENST00000413911 ZIM2Q9NZV7 527 aa21.06■□□□□ 0.96
AC005540.1-201ENST00000413911 PCDHB14Q9Y5E9 798 aa21.06■□□□□ 0.96
AC005540.1-201ENST00000413911 TRAF3IP2O43734 574 aaPredicted RBP21.05■□□□□ 0.96
AC005540.1-201ENST00000413911 HPRP00739 348 aa21.05■□□□□ 0.96
AC005540.1-201ENST00000413911 HOXB9P17482 250 aaPredicted RBP21.05■□□□□ 0.96
AC005540.1-201ENST00000413911 GRPRP30550 384 aa21.05■□□□□ 0.96
AC005540.1-201ENST00000413911 NEU4Q8WWR8 484 aaPredicted RBP21.05■□□□□ 0.96
AC005540.1-201ENST00000413911 GTF2H4Q92759 462 aa21.05■□□□□ 0.96
AC005540.1-201ENST00000413911 A4GALTQ9NPC4 353 aa21.05■□□□□ 0.96
AC005540.1-201ENST00000413911 HLA-DOBP13765 273 aa21.04■□□□□ 0.96
AC005540.1-201ENST00000413911 CBLP22681 906 aa21.04■□□□□ 0.96
AC005540.1-201ENST00000413911 POLR2JP52435 117 aaKnown RBP21.04■□□□□ 0.96
AC005540.1-201ENST00000413911 RIN1Q13671 783 aa21.04■□□□□ 0.96
AC005540.1-201ENST00000413911 SQLEQ14534 574 aa21.04■□□□□ 0.96
AC005540.1-201ENST00000413911 ADRM1Q16186 407 aa21.04■□□□□ 0.96
AC005540.1-201ENST00000413911 C6orf10Q5SRN2 563 aa21.04■□□□□ 0.96
AC005540.1-201ENST00000413911 MSANTD1Q6ZTZ1 278 aa21.04■□□□□ 0.96
AC005540.1-201ENST00000413911 C10orf111Q8N326 155 aa21.04■□□□□ 0.96
AC005540.1-201ENST00000413911 ZNF786Q8N393 782 aa21.04■□□□□ 0.96
AC005540.1-201ENST00000413911 GPR137CQ8N3F9 429 aa21.04■□□□□ 0.96
AC005540.1-201ENST00000413911 MGARPQ8TDB4 240 aa21.04■□□□□ 0.96
AC005540.1-201ENST00000413911 SLC35B4Q969S0 331 aa21.04■□□□□ 0.96
AC005540.1-201ENST00000413911 SNX18Q96RF0 628 aa21.04■□□□□ 0.96
AC005540.1-201ENST00000413911 ARMC7Q9H6L4 198 aa21.04■□□□□ 0.96
AC005540.1-201ENST00000413911 RMND5AQ9H871 391 aa21.04■□□□□ 0.96
AC005540.1-201ENST00000413911 MOV10Q9HCE1 1003 aaKnown RBP21.04■□□□□ 0.96
AC005540.1-201ENST00000413911 THUMPD1Q9NXG2 353 aaKnown RBP21.04■□□□□ 0.96
AC005540.1-201ENST00000413911 B3GNT2Q9NY97 397 aa21.04■□□□□ 0.96
AC005540.1-201ENST00000413911 A0A1B0GWA3 101 aa21.03■□□□□ 0.96
AC005540.1-201ENST00000413911 TMEM120BA0PK00 339 aa21.03■□□□□ 0.96
AC005540.1-201ENST00000413911 MS4A18H0YCH9 400 aa21.03■□□□□ 0.96
AC005540.1-201ENST00000413911 AIM2O14862 343 aa21.03■□□□□ 0.96
AC005540.1-201ENST00000413911 C8BP07358 591 aa21.03■□□□□ 0.96
AC005540.1-201ENST00000413911 ADRA2AP08913 450 aa21.03■□□□□ 0.96
AC005540.1-201ENST00000413911 BMP2P12643 396 aa21.03■□□□□ 0.96
AC005540.1-201ENST00000413911 APEX1P27695 318 aaKnown RBP21.03■□□□□ 0.96
AC005540.1-201ENST00000413911 GTF2E2P29084 291 aaKnown RBP21.03■□□□□ 0.96
AC005540.1-201ENST00000413911 ARR3P36575 388 aa21.03■□□□□ 0.96
AC005540.1-201ENST00000413911 CHN2P52757 468 aa21.03■□□□□ 0.96
AC005540.1-201ENST00000413911 SNTB2Q13425 540 aaKnown RBP21.03■□□□□ 0.96
AC005540.1-201ENST00000413911 C1DQ13901 141 aaKnown RBP21.03■□□□□ 0.96
AC005540.1-201ENST00000413911 MS4A18Q3C1V0 323 aa21.03■□□□□ 0.96
AC005540.1-201ENST00000413911 FAM69AQ5T7M9 428 aa21.03■□□□□ 0.96
AC005540.1-201ENST00000413911 KRT80Q6KB66 452 aa21.03■□□□□ 0.96
AC005540.1-201ENST00000413911 SLC2A7Q6PXP3 512 aa21.03■□□□□ 0.96
AC005540.1-201ENST00000413911 NHLRC1Q6VVB1 395 aa21.03■□□□□ 0.96
AC005540.1-201ENST00000413911 CKAP2Q8WWK9 683 aa21.03■□□□□ 0.96
AC005540.1-201ENST00000413911 MS4A3Q96HJ5 214 aa21.03■□□□□ 0.96
AC005540.1-201ENST00000413911 ANKRD27Q96NW4 1050 aa21.03■□□□□ 0.96
AC005540.1-201ENST00000413911 RAB21Q9UL25 225 aa21.03■□□□□ 0.96
AC005540.1-201ENST00000413911 LOC102725191A0A1B0GVB3 256 aa21.02■□□□□ 0.96
AC005540.1-201ENST00000413911 M0R3G1 203 aa21.02■□□□□ 0.96
AC005540.1-201ENST00000413911 CLIC1O00299 241 aa21.02■□□□□ 0.96
AC005540.1-201ENST00000413911 HLA-HP01893 362 aa21.02■□□□□ 0.96
AC005540.1-201ENST00000413911 DAG1Q14118 895 aa21.02■□□□□ 0.96
AC005540.1-201ENST00000413911 GLIPR1L2Q4G1C9 344 aa21.02■□□□□ 0.96
AC005540.1-201ENST00000413911 H1FNTQ75WM6 255 aaPredicted RBP21.02■□□□□ 0.96
AC005540.1-201ENST00000413911 MSRB3Q8IXL7 192 aa21.02■□□□□ 0.96
AC005540.1-201ENST00000413911 LSMEM1Q8N8F7 131 aa21.02■□□□□ 0.96
AC005540.1-201ENST00000413911 BBS10Q8TAM1 723 aa21.02■□□□□ 0.96
AC005540.1-201ENST00000413911 UBASH3BQ8TF42 649 aa21.02■□□□□ 0.96
AC005540.1-201ENST00000413911 ZNF75AQ96N20 296 aa21.02■□□□□ 0.96
AC005540.1-201ENST00000413911 EMC6Q9BV81 110 aa21.02■□□□□ 0.96
AC005540.1-201ENST00000413911 TPK1Q9H3S4 243 aa21.02■□□□□ 0.96
AC005540.1-201ENST00000413911 C12orf10Q9HB07 376 aa21.02■□□□□ 0.96
AC005540.1-201ENST00000413911 SLC25A37Q9NYZ2 338 aa21.02■□□□□ 0.96
AC005540.1-201ENST00000413911 KLHL14Q9P2G3 628 aa21.02■□□□□ 0.96
AC005540.1-201ENST00000413911 TMEM247A6NEH6 219 aa21.01■□□□□ 0.95
AC005540.1-201ENST00000413911 ZNF99A8MXY4 864 aaPredicted RBP21.01■□□□□ 0.95
AC005540.1-201ENST00000413911 HAX1O00165 279 aa21.01■□□□□ 0.95
AC005540.1-201ENST00000413911 UBDO15205 165 aa21.01■□□□□ 0.95
AC005540.1-201ENST00000413911 TPST1O60507 370 aa21.01■□□□□ 0.95
AC005540.1-201ENST00000413911 CAPZA2P47755 286 aa21.01■□□□□ 0.95
AC005540.1-201ENST00000413911 CARD17Q5XLA6 110 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms