RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 PRSS57Q6UWY2 283 aa4□□□□□ -1.77
LSM5-205ENST00000409952 MBOAT1Q6ZNC8 495 aa4□□□□□ -1.77
LSM5-205ENST00000409952 BHLHA9Q7RTU4 235 aa4□□□□□ -1.77
LSM5-205ENST00000409952 NKAIN4Q8IVV8 208 aa4□□□□□ -1.77
LSM5-205ENST00000409952 C17orf78Q8N4C9 275 aa4□□□□□ -1.77
LSM5-205ENST00000409952 TRAM1L1Q8N609 369 aa4□□□□□ -1.77
LSM5-205ENST00000409952 NUP37Q8NFH4 326 aa4□□□□□ -1.77
LSM5-205ENST00000409952 OR10H4Q8NGA5 316 aa4□□□□□ -1.77
LSM5-205ENST00000409952 FLVCR1-AS1Q8TAF5 88 aa4□□□□□ -1.77
LSM5-205ENST00000409952 TCP10LQ8TDR4 215 aa4□□□□□ -1.77
LSM5-205ENST00000409952 ADAMTS16Q8TE57 1224 aa4□□□□□ -1.77
LSM5-205ENST00000409952 ISOC2Q96AB3 205 aa4□□□□□ -1.77
LSM5-205ENST00000409952 ZNF524Q96C55 264 aa4□□□□□ -1.77
LSM5-205ENST00000409952 MS4A14Q96JA4 679 aa4□□□□□ -1.77
LSM5-205ENST00000409952 ZNF396Q96N95 335 aaPredicted RBP4□□□□□ -1.77
LSM5-205ENST00000409952 NAPGQ99747 312 aaPredicted RBP4□□□□□ -1.77
LSM5-205ENST00000409952 CHID1Q9BWS9 393 aa4□□□□□ -1.77
LSM5-205ENST00000409952 HCAR1Q9BXC0 346 aa4□□□□□ -1.77
LSM5-205ENST00000409952 NDEL1Q9GZM8 345 aa4□□□□□ -1.77
LSM5-205ENST00000409952 HDHD2Q9H0R4 259 aa4□□□□□ -1.77
LSM5-205ENST00000409952 SPHK2Q9NRA0 654 aa4□□□□□ -1.77
LSM5-205ENST00000409952 KIF25Q9UIL4 384 aa4□□□□□ -1.77
LSM5-205ENST00000409952 SPATA2Q9UM82 520 aa4□□□□□ -1.77
LSM5-205ENST00000409952 CACNA1IQ9P0X4 2223 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 A0A1B0GWB2 263 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 E7EWF7 191 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 E9PLD3 99 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 CCL21O00585 134 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 VAPBO95292 243 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 CD160O95971 181 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 MGMTP16455 207 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 NPR2P20594 1047 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 HTR1FP30939 366 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 SPRP35270 261 aaPredicted RBP3.99□□□□□ -1.77
LSM5-205ENST00000409952 CSKP41240 450 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 CRATP43155 626 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 OR1D4P47884 311 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 TFPI2P48307 235 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 CSRP3P50461 194 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 UCNP55089 124 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 UBE2MP61081 183 aaKnown RBP3.99□□□□□ -1.77
LSM5-205ENST00000409952 SNRPD1P62314 119 aaKnown RBP3.99□□□□□ -1.77
LSM5-205ENST00000409952 FKBP3Q00688 224 aaKnown RBP3.99□□□□□ -1.77
LSM5-205ENST00000409952 TLE4Q04727 773 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 SIGLEC14Q08ET2 396 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 STX3Q13277 289 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 CCL14Q16627 93 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 IZUMO4Q1ZYL8 232 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 PGGHGQ32M88 737 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 PTPN20Q4JDL3 420 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 FAM53AQ6NSI3 398 aaPredicted RBP3.99□□□□□ -1.77
LSM5-205ENST00000409952 GPRIN3Q6ZVF9 776 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 SLC35D2Q76EJ3 337 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 SLC26A11Q86WA9 606 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 APLFQ8IW19 511 aaPredicted RBP3.99□□□□□ -1.77
LSM5-205ENST00000409952 SELENOHQ8IZQ5 122 aaKnown RBP3.99□□□□□ -1.77
LSM5-205ENST00000409952 METTL4Q8N3J2 472 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 OR56B4Q8NH76 319 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 APH1AQ96BI3 265 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 ECHDC3Q96DC8 303 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 ATXN7L3BQ96GX2 97 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 HSFY1Q96LI6 401 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 MS4A4EQ96PG1 132 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 OR8B4Q96RC9 309 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 SH3GL1Q99961 368 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 MAP1LC3CQ9BXW4 147 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 KIR3DX1Q9H7L2 352 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 CAB39LQ9H9S4 337 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 RETNQ9HD89 108 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 SAMSN1Q9NSI8 373 aaKnown RBP3.99□□□□□ -1.77
LSM5-205ENST00000409952 SLC22A14Q9Y267 594 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 POFUT2Q9Y2G5 429 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 PCDHGB1Q9Y5G3 927 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 AUP1Q9Y679 476 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 CDH10Q9Y6N8 788 aa3.99□□□□□ -1.77
LSM5-205ENST00000409952 UBN2Q6ZU65 1347 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 CDHR2Q9BYE9 1310 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 FAM172BPA6NC97 362 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 TFECO14948 347 aaPredicted RBP3.98□□□□□ -1.77
LSM5-205ENST00000409952 GPAA1O43292 621 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 BUB3O43684 328 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 SLC19A2O60779 497 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 ENTPD5O75356 428 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 NDUFS6O75380 124 aaKnown RBP3.98□□□□□ -1.77
LSM5-205ENST00000409952 SCRG1O75711 98 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 CRTAPO75718 401 aaPredicted RBP3.98□□□□□ -1.77
LSM5-205ENST00000409952 FGGP02679 453 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 SERPINB2P05120 415 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 HCKP08631 526 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 KRT16P08779 473 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 CTRB1P17538 263 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 EPHX2P34913 555 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 CDKN2AP42771 156 aaKnown RBP3.98□□□□□ -1.77
LSM5-205ENST00000409952 RPS15AP62244 130 aaKnown RBP3.98□□□□□ -1.77
LSM5-205ENST00000409952 SKP1P63208 163 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 CTAG1AP78358 180 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 CSNK1G2P78368 415 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 FHL1Q13642 323 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 ZNF146Q15072 292 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 TSC22D1Q15714 1073 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms