RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 SLC6A1P30531 599 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 EEF1A1P68104 462 aaKnown RBP12.25□□□□□ -0.45
COL6A2-204ENST00000409416 TOMM34Q15785 309 aaPredicted RBP12.25□□□□□ -0.45
COL6A2-204ENST00000409416 LAMTOR1Q6IAA8 161 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 OR7E24Q6IFN5 339 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 CORO6Q6QEF8 472 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 LRRN1Q6UXK5 716 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 TMEM184AQ6ZMB5 413 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 TMED4Q7Z7H5 227 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 GPALPP1Q8IXQ4 340 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 C19orf47Q8N9M1 422 aaKnown RBP12.25□□□□□ -0.45
COL6A2-204ENST00000409416 ZNF649Q9BS31 505 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 CFHR5Q9BXR6 569 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 B3GNT4Q9C0J1 378 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 ANKRD19PQ9H560 264 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 PDE7BQ9NP56 450 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 CMC2Q9NRP2 79 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 POT1Q9NUX5 634 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 FKBP7Q9Y680 259 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 PLATP00750 562 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 IGKV1D-16P01601 117 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 SLC2A1P11166 492 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 IL32P24001 234 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 RBMS1P29558 406 aaKnown RBP12.25□□□□□ -0.45
COL6A2-204ENST00000409416 ZNF85Q03923 595 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 ZNF627Q7L945 461 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 MRGPREQ86SM8 312 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 BATF2Q8N1L9 274 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 CA13Q8N1Q1 262 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 FAM109AQ8N4B1 249 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 BOLLQ8N9W6 283 aaKnown RBP12.25□□□□□ -0.45
COL6A2-204ENST00000409416 ZNF527Q8NB42 609 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 DUSP19Q8WTR2 217 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 MS4A3Q96HJ5 214 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 C10orf90Q96M02 699 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 SPACA5Q96QH8 159 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 LRRC61Q9BV99 259 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 OR10A5Q9H207 317 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 ADGRL4Q9HBW9 690 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 GMEB2Q9UKD1 530 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 ZMIZ1Q9ULJ6 1067 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 SIGLEC7Q9Y286 467 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 H0YIG0 161 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 GALR3O60755 368 aaPredicted RBP12.24□□□□□ -0.45
COL6A2-204ENST00000409416 IL9P15248 144 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 NPR2P20594 1047 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 SLC6A6P31641 620 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 HSD17B12Q53GQ0 312 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 PRAMEF20Q5VT98 475 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 PRAMEF8Q5VWM4 474 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 PRAMEF7Q5VXH5 474 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 OR10K2Q6IF99 312 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 ZNF425Q6IV72 752 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 Q7L0L9 218 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 FAM220AQ7Z4H9 259 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 JAGN1Q8N5M9 183 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 CHST4Q8NCG5 386 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 SMOC1Q9H4F8 434 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 ERVMER34-1Q9H9K5 563 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 TCF7L1Q9HCS4 588 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 GRHPRQ9UBQ7 328 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 FARSAQ9Y285 508 aaKnown RBP12.24□□□□□ -0.45
COL6A2-204ENST00000409416 PCDH15Q96QU1 1955 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 ADRB1P08588 477 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 PRKXP51817 358 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 EIF2B5Q13144 721 aaKnown RBP12.24□□□□□ -0.45
COL6A2-204ENST00000409416 DUSP8Q13202 625 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 FCRLAQ7L513 359 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 LSM14AQ8ND56 463 aaKnown RBP12.24□□□□□ -0.45
COL6A2-204ENST00000409416 SP7Q8TDD2 431 aaPredicted RBP12.24□□□□□ -0.45
COL6A2-204ENST00000409416 BRIX1Q8TDN6 353 aaKnown RBP12.24□□□□□ -0.45
COL6A2-204ENST00000409416 METTL21AQ8WXB1 218 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 ZNF578Q96N58 590 aaPredicted RBP12.24□□□□□ -0.45
COL6A2-204ENST00000409416 FBXL3Q9UKT7 428 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 PIEZO2Q9H5I5 2752 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 FRYQ5TBA9 3013 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 CIB4A0PJX0 185 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 ANXA2P2A6NMY6 339 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 B8ZZF3 427 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 PRAMEF26H0Y7S4 382 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 WNT1P04628 370 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 ANXA2P07355 339 aaKnown RBP12.24□□□□□ -0.45
COL6A2-204ENST00000409416 CCKBRP32239 447 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 FZD5Q13467 585 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 MDGA2Q7Z553 956 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 OR2L13Q8N349 312 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 DVL3Q92997 716 aaPredicted RBP12.24□□□□□ -0.45
COL6A2-204ENST00000409416 ELSPBP1Q96BH3 223 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 ZNF764Q96H86 408 aaPredicted RBP12.24□□□□□ -0.45
COL6A2-204ENST00000409416 MOGAT1Q96PD6 335 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 KCNJ15Q99712 375 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 SOSTQ9BQB4 213 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 METTL17Q9H7H0 456 aaPredicted RBP12.24□□□□□ -0.45
COL6A2-204ENST00000409416 NOX4Q9NPH5 578 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 TMEM184BQ9Y519 407 aaPredicted RBP12.24□□□□□ -0.45
COL6A2-204ENST00000409416 ESPL1Q14674 2120 aa12.24□□□□□ -0.45
COL6A2-204ENST00000409416 POM121CA8CG34 1229 aa12.23□□□□□ -0.45
COL6A2-204ENST00000409416 TACR3P29371 465 aa12.23□□□□□ -0.45
COL6A2-204ENST00000409416 GDNFP39905 211 aa12.23□□□□□ -0.45
COL6A2-204ENST00000409416 PLCXD2Q0VAA5 305 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms