RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 MS4A18Q3C1V0 323 aa16.82■□□□□ 0.28
SMARCB1-204ENST00000407422 C1QTNF12Q5T7M4 302 aa16.82■□□□□ 0.28
SMARCB1-204ENST00000407422 ZNF544Q6NX49 715 aa16.82■□□□□ 0.28
SMARCB1-204ENST00000407422 NET1Q7Z628 596 aaPredicted RBP16.82■□□□□ 0.28
SMARCB1-204ENST00000407422 RANBP3LQ86VV4 465 aaPredicted RBP16.82■□□□□ 0.28
SMARCB1-204ENST00000407422 TSPEARQ8WU66 669 aa16.82■□□□□ 0.28
SMARCB1-204ENST00000407422 ZNF837Q96EG3 531 aaPredicted RBP16.82■□□□□ 0.28
SMARCB1-204ENST00000407422 MOGAT1Q96PD6 335 aa16.82■□□□□ 0.28
SMARCB1-204ENST00000407422 SIKE1Q9BRV8 207 aa16.82■□□□□ 0.28
SMARCB1-204ENST00000407422 TMEM120AQ9BXJ8 343 aa16.82■□□□□ 0.28
SMARCB1-204ENST00000407422 BARX1Q9HBU1 254 aaPredicted RBP16.82■□□□□ 0.28
SMARCB1-204ENST00000407422 OBP2BQ9NPH6 170 aa16.82■□□□□ 0.28
SMARCB1-204ENST00000407422 FBP2O00757 339 aa16.81■□□□□ 0.28
SMARCB1-204ENST00000407422 TRAF3IP2O43734 574 aaPredicted RBP16.81■□□□□ 0.28
SMARCB1-204ENST00000407422 BGLAPP02818 100 aa16.81■□□□□ 0.28
SMARCB1-204ENST00000407422 SF3A3Q12874 501 aaKnown RBP eCLIP16.81■□□□□ 0.281e-6■■■■□ 22.8
SMARCB1-204ENST00000407422 NPTX1Q15818 432 aa16.81■□□□□ 0.28
SMARCB1-204ENST00000407422 NRF1Q16656 503 aa16.81■□□□□ 0.28
SMARCB1-204ENST00000407422 OR6T1Q8NGN1 323 aa16.81■□□□□ 0.28
SMARCB1-204ENST00000407422 OR10A6Q8NH74 314 aa16.81■□□□□ 0.28
SMARCB1-204ENST00000407422 SLC41A3Q96GZ6 507 aa16.81■□□□□ 0.28
SMARCB1-204ENST00000407422 ADAD1Q96M93 576 aaKnown RBP16.81■□□□□ 0.28
SMARCB1-204ENST00000407422 SLC38A2Q96QD8 506 aa16.81■□□□□ 0.28
SMARCB1-204ENST00000407422 OR2M2Q96R28 347 aa16.81■□□□□ 0.28
SMARCB1-204ENST00000407422 MCHR1Q99705 422 aa16.81■□□□□ 0.28
SMARCB1-204ENST00000407422 ARHGDIGQ99819 225 aa16.81■□□□□ 0.28
SMARCB1-204ENST00000407422 LOC102725191A0A1B0GVB3 256 aa16.81■□□□□ 0.28
SMARCB1-204ENST00000407422 SLC43A1O75387 559 aa16.81■□□□□ 0.28
SMARCB1-204ENST00000407422 NQO1P15559 274 aaKnown RBP16.81■□□□□ 0.28
SMARCB1-204ENST00000407422 UBE2NP61088 152 aaKnown RBP16.81■□□□□ 0.28
SMARCB1-204ENST00000407422 ARF1P84077 181 aaKnown RBP16.81■□□□□ 0.28
SMARCB1-204ENST00000407422 METTL21CQ5VZV1 264 aa16.81■□□□□ 0.28
SMARCB1-204ENST00000407422 ANKRD16Q6P6B7 361 aa16.81■□□□□ 0.28
SMARCB1-204ENST00000407422 RBM45Q8IUH3 476 aaKnown RBP16.81■□□□□ 0.28
SMARCB1-204ENST00000407422 TMEM123Q8N131 208 aa16.81■□□□□ 0.28
SMARCB1-204ENST00000407422 ADPRHL1Q8NDY3 354 aa16.81■□□□□ 0.28
SMARCB1-204ENST00000407422 OR4D11Q8NGI4 311 aa16.81■□□□□ 0.28
SMARCB1-204ENST00000407422 GPR35Q9HC97 309 aa16.81■□□□□ 0.28
SMARCB1-204ENST00000407422 ARPC4-TTLL3A0A0A6YYG9 625 aa16.8■□□□□ 0.28
SMARCB1-204ENST00000407422 RPL36A-HNRNPH2H7BZ11 118 aa16.8■□□□□ 0.28
SMARCB1-204ENST00000407422 APOBEC3AP31941 199 aaPredicted RBP16.8■□□□□ 0.28
SMARCB1-204ENST00000407422 GZMMP51124 257 aa16.8■□□□□ 0.28
SMARCB1-204ENST00000407422 NUDT6P53370 316 aa16.8■□□□□ 0.28
SMARCB1-204ENST00000407422 PHYHD1Q5SRE7 291 aa16.8■□□□□ 0.28
SMARCB1-204ENST00000407422 TSPYL5Q86VY4 417 aaPredicted RBP16.8■□□□□ 0.28
SMARCB1-204ENST00000407422 WDFY1Q8IWB7 410 aa16.8■□□□□ 0.28
SMARCB1-204ENST00000407422 OR6S1Q8NH40 331 aa16.8■□□□□ 0.28
SMARCB1-204ENST00000407422 MAGEE2Q8TD90 523 aaPredicted RBP16.8■□□□□ 0.28
SMARCB1-204ENST00000407422 TAMM41Q96BW9 452 aa16.8■□□□□ 0.28
SMARCB1-204ENST00000407422 EPYCQ99645 322 aa16.8■□□□□ 0.28
SMARCB1-204ENST00000407422 EMC6Q9BV81 110 aa16.8■□□□□ 0.28
SMARCB1-204ENST00000407422 SEC61A2Q9H9S3 476 aa16.8■□□□□ 0.28
SMARCB1-204ENST00000407422 CRLF2Q9HC73 371 aa16.8■□□□□ 0.28
SMARCB1-204ENST00000407422 CUBNO60494 3623 aa16.8■□□□□ 0.28
SMARCB1-204ENST00000407422 DNHD1Q96M86 4753 aa16.8■□□□□ 0.28
SMARCB1-204ENST00000407422 YLPM1P49750 1951 aaKnown RBP16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 IGHV4-30-2A0A087WSY4 118 aa16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 CPSF4LA6NMK7 179 aaKnown RBP16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 THY1P04216 161 aa16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 C8BP07358 591 aa16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 CD247P20963 164 aa16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 PCGF2P35227 344 aa16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 SH3BGRP55822 239 aaPredicted RBP16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 PPP2R2BQ00005 443 aa16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 MFSD13AQ14CX5 517 aa16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 RAB35Q15286 201 aa16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 MST1LQ2TV78 715 aa16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 CEACAM16Q2WEN9 425 aa16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 SWT1Q5T5J6 900 aaKnown RBP16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 CARD17Q5XLA6 110 aa16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 ZNF613Q6PF04 617 aa16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 NHLRC1Q6VVB1 395 aa16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 LINC00114Q6XXX2 140 aa16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 WDR88Q6ZMY6 472 aa16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 UEVLDQ8IX04 471 aa16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 GPR137CQ8N3F9 429 aa16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 C10orf53Q8N6V4 93 aa16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 VANGL1Q8TAA9 524 aaPredicted RBP16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 TXNDC15Q96J42 360 aa16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 TMEM43Q9BTV4 400 aa16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 ASPNQ9BXN1 380 aa16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 EVA1AQ9H8M9 152 aa16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 CRNNQ9UBG3 495 aaPredicted RBP16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 CORINQ9Y5Q5 1042 aa16.79■□□□□ 0.28
SMARCB1-204ENST00000407422 SVEP1Q4LDE5 3571 aa16.78■□□□□ 0.28
SMARCB1-204ENST00000407422 ZNF503-AS2A6NEH8 195 aa16.78■□□□□ 0.28
SMARCB1-204ENST00000407422 H7C417 338 aa16.78■□□□□ 0.28
SMARCB1-204ENST00000407422 M0R3G1 203 aa16.78■□□□□ 0.28
SMARCB1-204ENST00000407422 FMO6PO60774 539 aa16.78■□□□□ 0.28
SMARCB1-204ENST00000407422 SEC14L2O76054 403 aa16.78■□□□□ 0.28
SMARCB1-204ENST00000407422 CECR9P0C854 216 aa16.78■□□□□ 0.28
SMARCB1-204ENST00000407422 CRYBA2P53672 197 aa16.78■□□□□ 0.28
SMARCB1-204ENST00000407422 POU3F1Q03052 451 aaPredicted RBP16.78■□□□□ 0.28
SMARCB1-204ENST00000407422 PMS2P3Q13401 168 aa16.78■□□□□ 0.28
SMARCB1-204ENST00000407422 RABL3Q5HYI8 236 aa16.78■□□□□ 0.28
SMARCB1-204ENST00000407422 ENTPD8Q5MY95 495 aa16.78■□□□□ 0.28
SMARCB1-204ENST00000407422 NANOGP8Q6NSW7 305 aa16.78■□□□□ 0.28
SMARCB1-204ENST00000407422 MYPOPQ86VE0 399 aaPredicted RBP16.78■□□□□ 0.28
SMARCB1-204ENST00000407422 PRIMA1Q86XR5 153 aa16.78■□□□□ 0.28
SMARCB1-204ENST00000407422 SCAIQ8N9R8 606 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms