RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 A0A1W2PNV4 684 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 FAM183AA6NL82 134 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 RIIAD1A6NNX1 92 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 KDM4EB2RXH2 506 aaPredicted RBP24.62■■□□□ 1.53
CPNE1-203ENST00000397442 IMPA2O14732 288 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 SDHAP31040 664 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 ITGADQ13349 1161 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 CRMP1Q14194 572 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 MEDAGQ5VYS4 303 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 PAQR6Q6TCH4 344 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 CPOQ8IVL8 374 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 LSM14AQ8ND56 463 aaKnown RBP24.62■■□□□ 1.53
CPNE1-203ENST00000397442 ANKK1Q8NFD2 765 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 OR52E2Q8NGJ4 325 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 DDOQ99489 341 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 HCAR1Q9BXC0 346 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 SRXN1Q9BYN0 137 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 ZNF346Q9UL40 294 aaKnown RBP24.62■■□□□ 1.53
CPNE1-203ENST00000397442 AQP7P3A6NL99 342 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 EIF1AYO14602 144 aaKnown RBP24.62■■□□□ 1.53
CPNE1-203ENST00000397442 SEC14L5O43304 696 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 RAMP1O60894 148 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 FAM20BO75063 409 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 PLGP00747 810 aaPredicted RBP24.62■■□□□ 1.53
CPNE1-203ENST00000397442 IGHMP01871 453 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 ZNF24P17028 368 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 CLDN18P56856 261 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 CSNK2A1P68400 391 aaPredicted RBP24.62■■□□□ 1.53
CPNE1-203ENST00000397442 SLC35A2P78381 396 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 NHLRC1Q6VVB1 395 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 UBQLNLQ8IYU4 475 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 SLC37A3Q8NCC5 494 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 BBS1Q8NFJ9 593 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 NEIL3Q8TAT5 605 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 PTP4A1Q93096 173 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 TAAR6Q96RI8 345 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 DUSP21Q9H596 190 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 PSORS1C1Q9UIG5 152 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 KLHL21Q9UJP4 597 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 BLOC1S6Q9UL45 172 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 TP53TG5Q9Y2B4 290 aa24.62■■□□□ 1.53
CPNE1-203ENST00000397442 DNAJC13O75165 2243 aa24.61■■□□□ 1.53
CPNE1-203ENST00000397442 ZNF3P17036 446 aa24.61■■□□□ 1.53
CPNE1-203ENST00000397442 GABARAPL2P60520 117 aa24.61■■□□□ 1.53
CPNE1-203ENST00000397442 KHDRBS1Q07666 443 aaKnown RBP eCLIP24.61■■□□□ 1.53
CPNE1-203ENST00000397442 DBPQ10586 325 aaPredicted RBP24.61■■□□□ 1.53
CPNE1-203ENST00000397442 APOFQ13790 326 aa24.61■■□□□ 1.53
CPNE1-203ENST00000397442 ACKR1Q16570 336 aa24.61■■□□□ 1.53
CPNE1-203ENST00000397442 GPR139Q6DWJ6 353 aa24.61■■□□□ 1.53
CPNE1-203ENST00000397442 PLBD1Q6P4A8 553 aa24.61■■□□□ 1.53
CPNE1-203ENST00000397442 CXXC5Q7LFL8 322 aaKnown RBP24.61■■□□□ 1.53
CPNE1-203ENST00000397442 PXKQ7Z7A4 578 aa24.61■■□□□ 1.53
CPNE1-203ENST00000397442 CYB561A3Q8NBI2 242 aa24.61■■□□□ 1.53
CPNE1-203ENST00000397442 NPEPL1Q8NDH3 523 aa24.61■■□□□ 1.53
CPNE1-203ENST00000397442 SDR9C7Q8NEX9 313 aa24.61■■□□□ 1.53
CPNE1-203ENST00000397442 TSPAN14Q8NG11 270 aa24.61■■□□□ 1.53
CPNE1-203ENST00000397442 TXNIPQ9H3M7 391 aa24.61■■□□□ 1.53
CPNE1-203ENST00000397442 MED20Q9H944 212 aa24.61■■□□□ 1.53
CPNE1-203ENST00000397442 FKBP14Q9NWM8 211 aa24.61■■□□□ 1.53
CPNE1-203ENST00000397442 SCN3BQ9NY72 215 aa24.61■■□□□ 1.53
CPNE1-203ENST00000397442 GRHPRQ9UBQ7 328 aa24.61■■□□□ 1.53
CPNE1-203ENST00000397442 PTGES3LE9PB15 166 aa24.6■■□□□ 1.53
CPNE1-203ENST00000397442 SERPINI2O75830 405 aa24.6■■□□□ 1.53
CPNE1-203ENST00000397442 IFNGP01579 166 aa24.6■■□□□ 1.53
CPNE1-203ENST00000397442 HTR1AP08908 422 aa24.6■■□□□ 1.53
CPNE1-203ENST00000397442 ZNF708P17019 499 aa24.6■■□□□ 1.53
CPNE1-203ENST00000397442 SLC15A1P46059 708 aa24.6■■□□□ 1.53
CPNE1-203ENST00000397442 AGFG1P52594 562 aaKnown RBP24.6■■□□□ 1.53
CPNE1-203ENST00000397442 RAC3P60763 192 aa24.6■■□□□ 1.53
CPNE1-203ENST00000397442 MESTQ5EB52 335 aa24.6■■□□□ 1.53
CPNE1-203ENST00000397442 EMC4Q5J8M3 183 aa24.6■■□□□ 1.53
CPNE1-203ENST00000397442 NXNL2Q5VZ03 156 aa24.6■■□□□ 1.53
CPNE1-203ENST00000397442 HBMQ6B0K9 141 aa24.6■■□□□ 1.53
CPNE1-203ENST00000397442 ASB18Q6ZVZ8 466 aa24.6■■□□□ 1.53
CPNE1-203ENST00000397442 OR2V1Q8NHB1 315 aa24.6■■□□□ 1.53
CPNE1-203ENST00000397442 B3GNT3Q9Y2A9 372 aa24.6■■□□□ 1.53
CPNE1-203ENST00000397442 TPRKBQ9Y3C4 175 aa24.6■■□□□ 1.53
CPNE1-203ENST00000397442 ALPK2Q86TB3 2170 aa24.6■■□□□ 1.53
CPNE1-203ENST00000397442 TFECO14948 347 aaPredicted RBP24.59■■□□□ 1.53
CPNE1-203ENST00000397442 PRODHO43272 600 aa24.59■■□□□ 1.53
CPNE1-203ENST00000397442 DNPH1O43598 174 aa24.59■■□□□ 1.53
CPNE1-203ENST00000397442 EIF1BO60739 113 aaKnown RBP24.59■■□□□ 1.53
CPNE1-203ENST00000397442 CDKN2AP42771 156 aaKnown RBP24.59■■□□□ 1.53
CPNE1-203ENST00000397442 RPL27P61353 136 aaKnown RBP24.59■■□□□ 1.53
CPNE1-203ENST00000397442 ZNF540Q8NDQ6 660 aa24.59■■□□□ 1.53
CPNE1-203ENST00000397442 OR10D3Q8NH80 312 aa24.59■■□□□ 1.53
CPNE1-203ENST00000397442 ZNF519Q8TB69 540 aa24.59■■□□□ 1.53
CPNE1-203ENST00000397442 ZPLD1Q8TCW7 415 aa24.59■■□□□ 1.53
CPNE1-203ENST00000397442 GGHQ92820 318 aa24.59■■□□□ 1.53
CPNE1-203ENST00000397442 ABTB1Q969K4 478 aaPredicted RBP24.59■■□□□ 1.53
CPNE1-203ENST00000397442 NMNAT3Q96T66 252 aa24.59■■□□□ 1.53
CPNE1-203ENST00000397442 ATMQ13315 3056 aa24.59■■□□□ 1.53
CPNE1-203ENST00000397442 CLCA1A8K7I4 914 aa24.59■■□□□ 1.53
CPNE1-203ENST00000397442 IGHG3P01860 377 aa24.59■■□□□ 1.53
CPNE1-203ENST00000397442 CARD18P57730 90 aa24.59■■□□□ 1.53
CPNE1-203ENST00000397442 HSF1Q00613 529 aa24.59■■□□□ 1.53
CPNE1-203ENST00000397442 PIGFQ07326 219 aa24.59■■□□□ 1.53
CPNE1-203ENST00000397442 KRR1Q13601 381 aaKnown RBP24.59■■□□□ 1.53
CPNE1-203ENST00000397442 VASNQ6EMK4 673 aa24.59■■□□□ 1.53
CPNE1-203ENST00000397442 TMEM154Q6P9G4 183 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms