RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 NDUFB8O95169 186 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 TMEM50AO95807 157 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 WDPCPO95876 746 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 HLA-HP01893 362 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 HBQ1P09105 142 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 CA4P22748 312 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 IGFBP6P24592 240 aaPredicted RBP3.16□□□□□ -1.9
XRN1-202ENST00000392981 P2RY1P47900 373 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 GLIPR1P48060 266 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 SLC1A5Q15758 541 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 COX19Q49B96 90 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 LINC01620Q4KN68 170 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 OR52E8Q6IFG1 317 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 TMEM99Q8N816 258 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 CCDC54Q8NEL0 328 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 RNASE11Q8TAA1 199 aaKnown RBP3.16□□□□□ -1.9
XRN1-202ENST00000392981 PAK1IP1Q9NWT1 392 aaPredicted RBP3.16□□□□□ -1.9
XRN1-202ENST00000392981 FAM206AQ9NX38 181 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 KIAA0586Q9BVV6 1533 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 FAM135AQ9P2D6 1515 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 CLIP1P30622 1438 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 KBTBD11-OT1A0A1B0GTJ5 212 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 OR5H15A6NDH6 313 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 DENRO43583 198 aaKnown RBP3.16□□□□□ -1.9
XRN1-202ENST00000392981 MED26O95402 600 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 CXCR2P25025 360 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 RFC3P40938 356 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 OR2B8PP59922 312 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 DHODHQ02127 395 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 NDUFA9Q16795 377 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 ZBED5Q49AG3 693 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 ZNF517Q6ZMY9 492 aaPredicted RBP3.16□□□□□ -1.9
XRN1-202ENST00000392981 ABHD12BQ7Z5M8 362 aaPredicted RBP3.16□□□□□ -1.9
XRN1-202ENST00000392981 ESR2Q92731 530 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 CREB3L1Q96BA8 519 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 ZBED6CLQ96FA7 236 aaPredicted RBP3.16□□□□□ -1.9
XRN1-202ENST00000392981 SCGB3A2Q96PL1 93 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 LPAR4Q99677 370 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 RARRES2Q99969 163 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 CALN1Q9BXU9 219 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 METTL9Q9H1A3 318 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 IKZF5Q9H5V7 419 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 METTL8Q9H825 291 aaKnown RBP3.16□□□□□ -1.9
XRN1-202ENST00000392981 IL37Q9NZH6 218 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 CLN8Q9UBY8 286 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 L3MBTL1Q9Y468 752 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 LAMA1P25391 3075 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 A0A0G2JK05 382 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 A0A1W2PRG6 482 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 J3KR12 359 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 MATN3O15232 486 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 MPPED1O15442 326 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 CNOT3O75175 753 aaKnown RBP3.15□□□□□ -1.9
XRN1-202ENST00000392981 PEX11BO96011 259 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 OR9G9P0C7N8 305 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 TRIM49P0CI25 452 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 TRIM49CP0CI26 452 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 EDNRAP25101 427 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 CFHR2P36980 270 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 GCLMP48507 274 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 SLC35B1P78383 322 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 HPCAP84074 193 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 TAF1AQ15573 450 aaPredicted RBP3.15□□□□□ -1.9
XRN1-202ENST00000392981 EXOC3L4Q17RC7 722 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 MSMPQ1L6U9 139 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 C18orf21Q32NC0 220 aaPredicted RBP3.15□□□□□ -1.9
XRN1-202ENST00000392981 SOWAHCQ53LP3 525 aaPredicted RBP3.15□□□□□ -1.9
XRN1-202ENST00000392981 SFT2D3Q587I9 215 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 MEDAGQ5VYS4 303 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 PRR5LQ6MZQ0 368 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 GPRIN3Q6ZVF9 776 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 RANBP3LQ86VV4 465 aaPredicted RBP3.15□□□□□ -1.9
XRN1-202ENST00000392981 WDR31Q8NA23 367 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 OR52B6Q8NGF0 335 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 FGFBP3Q8TAT2 258 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 CELF6Q96J87 481 aaKnown RBP3.15□□□□□ -1.9
XRN1-202ENST00000392981 C4orf45Q96LM5 186 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 RNF145Q96MT1 663 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 ZNF75AQ96N20 296 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 MAP3K3Q99759 626 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 EBNA1BP2Q99848 306 aaKnown RBP3.15□□□□□ -1.9
XRN1-202ENST00000392981 Q9H8V8 135 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 ISG20L2Q9H9L3 353 aaKnown RBP3.15□□□□□ -1.9
XRN1-202ENST00000392981 TMEM272A0A1B0GTI8 110 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 SAGE2PA6NJ88 616 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 HACD1B0YJ81 288 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 F5H5T6 163 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 M0R036 132 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 ITGB1BP1O14713 200 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 ENTPD6O75354 484 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 EEDO75530 441 aaKnown RBP3.15□□□□□ -1.9
XRN1-202ENST00000392981 BCAR3O75815 825 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 NDUFA7O95182 113 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 HMGN1P05114 100 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 HKR1P10072 659 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 MYOGP15173 224 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 HLA-GP17693 338 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 OTX1P32242 354 aaPredicted RBP3.15□□□□□ -1.9
XRN1-202ENST00000392981 CRYBB2P43320 205 aa3.15□□□□□ -1.9
XRN1-202ENST00000392981 MAGEA12P43365 314 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms