RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 PLEKHA8Q96JA3 519 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 CNBD2Q96M20 576 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 MUS81Q96NY9 551 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 PRDM14Q9GZV8 571 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 PNPLA3Q9NST1 481 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 IMPAD1Q9NX62 359 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 GRHPRQ9UBQ7 328 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 NDRG4Q9ULP0 352 aaKnown RBP11.58□□□□□ -0.56
CBWD3-203ENST00000377344 RASD1Q9Y272 281 aa11.58□□□□□ -0.56
CBWD3-203ENST00000377344 USP24Q9UPU5 2620 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 CLCA1A8K7I4 914 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 M0R129 80 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 BHLHE40O14503 412 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 FZD7O75084 574 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 TPOP07202 933 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 CD14P08571 375 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 ABOP16442 354 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 ZNF43P17038 809 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 GGT2P36268 569 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 P2RY4P51582 365 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 RPS6KA3P51812 740 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 TDGF1P3P51864 188 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 ZP4Q12836 540 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 SNAPC1Q16533 368 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 SLX4IPQ5VYV7 408 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 ZNF585AQ6P3V2 769 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 GFRALQ6UXV0 394 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 SLC43A2Q8N370 569 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 LRRC75AQ8NAA5 344 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 ANKK1Q8NFD2 765 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 FNDC9Q8TBE3 224 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 OXGR1Q96P68 337 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 SLC38A2Q96QD8 506 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 APOL4Q9BPW4 351 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 SLX1AQ9BQ83 275 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 PRRG3Q9BZD7 231 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 SLC25A19Q9HC21 320 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 NRIP3Q9NQ35 241 aa11.57□□□□□ -0.56
CBWD3-203ENST00000377344 A0A1W2PNV4 684 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 VAMP5O95183 116 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 IL5RAQ01344 420 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 MELKQ14680 651 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 ACKR1Q16570 336 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 SLC35D2Q76EJ3 337 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 FGD2Q7Z6J4 655 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 PXKQ7Z7A4 578 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 C8orf59Q8N0T1 100 aaPredicted RBP11.56□□□□□ -0.56
CBWD3-203ENST00000377344 LNX2Q8N448 690 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 TSPAN32Q96QS1 320 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 TRIB1Q96RU8 372 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 GPX7Q96SL4 187 aaPredicted RBP11.56□□□□□ -0.56
CBWD3-203ENST00000377344 PITX2Q99697 317 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 RASSF1Q9NS23 344 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 MED29Q9NX70 200 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 B3GAT1Q9P2W7 334 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 ZNF346Q9UL40 294 aaKnown RBP11.56□□□□□ -0.56
CBWD3-203ENST00000377344 BAIAP2Q9UQB8 552 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 NOX1Q9Y5S8 564 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 TLN1Q9Y490 2541 aaKnown RBP11.56□□□□□ -0.56
CBWD3-203ENST00000377344 TEX13CA0A0J9YWL9 993 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 SLC22A20A6NK97 555 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 BCL10O95999 233 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 HMGN1P05114 100 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 IFNGR1P15260 489 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 GRK5P34947 590 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 RASGEF1BQ0VAM2 473 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 EEF1A1P5Q5VTE0 462 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 ZNF691Q5VV52 312 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 C12orf73Q69YU5 71 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 PTCHD4Q6ZW05 846 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 P4HA3Q7Z4N8 544 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 CCDC71Q8IV32 467 aaPredicted RBP11.56□□□□□ -0.56
CBWD3-203ENST00000377344 DEPDC4Q8N2C3 294 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 LSM14AQ8ND56 463 aaKnown RBP11.56□□□□□ -0.56
CBWD3-203ENST00000377344 SETD9Q8NE22 299 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 CPT1CQ8TCG5 803 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 ABHD3Q8WU67 409 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 UBE2FQ969M7 185 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 OTULINQ96BN8 352 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 ZNF775Q96BV0 537 aaPredicted RBP11.56□□□□□ -0.56
CBWD3-203ENST00000377344 RASD2Q96D21 266 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 Q96M85 177 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 ANKRD60Q9BZ19 345 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 LRRC42Q9Y546 428 aa11.56□□□□□ -0.56
CBWD3-203ENST00000377344 KIAA1549Q9HCM3 1950 aa11.55□□□□□ -0.56
CBWD3-203ENST00000377344 RIIAD1A6NNX1 92 aa11.55□□□□□ -0.56
CBWD3-203ENST00000377344 XKRYO14609 159 aa11.55□□□□□ -0.56
CBWD3-203ENST00000377344 CYTIPO60759 359 aa11.55□□□□□ -0.56
CBWD3-203ENST00000377344 AQP8O94778 261 aa11.55□□□□□ -0.56
CBWD3-203ENST00000377344 SLC2A10O95528 541 aa11.55□□□□□ -0.56
CBWD3-203ENST00000377344 HIST1H1CP16403 213 aaKnown RBP11.55□□□□□ -0.56
CBWD3-203ENST00000377344 SDHAP31040 664 aa11.55□□□□□ -0.56
CBWD3-203ENST00000377344 ACVR1BP36896 505 aa11.55□□□□□ -0.56
CBWD3-203ENST00000377344 DAP3P51398 398 aaKnown RBP11.55□□□□□ -0.56
CBWD3-203ENST00000377344 IL18R1Q13478 541 aa11.55□□□□□ -0.56
CBWD3-203ENST00000377344 MED21Q13503 144 aa11.55□□□□□ -0.56
CBWD3-203ENST00000377344 SLC17A1Q14916 467 aa11.55□□□□□ -0.56
CBWD3-203ENST00000377344 KRT80Q6KB66 452 aa11.55□□□□□ -0.56
CBWD3-203ENST00000377344 CD163Q86VB7 1156 aa11.55□□□□□ -0.56
CBWD3-203ENST00000377344 JAZF1Q86VZ6 243 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms