RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 MSX1P28360 303 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 RNF212Q495C1 297 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 OTUD1Q5VV17 481 aaPredicted RBP13.18□□□□□ -0.3
LMX1B-202ENST00000373474 TRAPPC6BQ86SZ2 158 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 AMDHD1Q96NU7 426 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 KCNIP2Q9NS61 270 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 CXXC1Q9P0U4 656 aaPredicted RBP13.18□□□□□ -0.3
LMX1B-202ENST00000373474 PPT2Q9UMR5 302 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 WIF1Q9Y5W5 379 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 RREB1Q92766 1687 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 HOXB5P09067 269 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 MGST1P10620 155 aaKnown RBP13.18□□□□□ -0.3
LMX1B-202ENST00000373474 MTHFD2P13995 350 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 MBTPS1Q14703 1052 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 CD276Q5ZPR3 534 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 PRICKLE2Q7Z3G6 844 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 ABHD4Q8TB40 342 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 DUSP19Q8WTR2 217 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 OR10A5Q9H207 317 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 OR10A2Q9H208 303 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 FBXL2Q9UKC9 423 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 VDAC3Q9Y277 283 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 SFTPDP35247 375 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 HCCSP53701 268 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 HBG1P69891 147 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 HBG2P69892 147 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 SQSTM1Q13501 440 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 ZNF266Q14584 549 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 SH2D5Q6ZV89 423 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 ANKRD53Q8N9V6 530 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 TAF1P21675 1872 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 KIAA1551Q9HCM1 1747 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 CEBPZOSA8MTT3 80 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 FAM227AF5H4B4 570 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 LCATP04180 440 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 ETV5P41161 510 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 MRPS34P82930 218 aaKnown RBP13.17□□□□□ -0.3
LMX1B-202ENST00000373474 MPEG1Q2M385 716 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 NDUFAF7Q7L592 441 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 KATNB1Q9BVA0 655 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 TCRBV5S2A0A599 114 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 TMEM212A6NML5 194 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 B4DXG7 233 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 CYTIPO60759 359 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 KLKB1P03952 638 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 F3P13726 295 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 BCKDHBP21953 392 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 TSFMP43897 325 aaKnown RBP13.17□□□□□ -0.3
LMX1B-202ENST00000373474 EFNA3P52797 238 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 ISL1P61371 349 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 DCAF7P61962 342 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 BTG1P62324 171 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 HTR4Q13639 388 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 AFMIDQ63HM1 303 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 VASNQ6EMK4 673 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 COX15Q7KZN9 410 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 C14orf79Q96F83 325 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 C11orf54Q9H0W9 315 aaPredicted RBP13.17□□□□□ -0.3
LMX1B-202ENST00000373474 R3HDMLQ9H3Y0 253 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 SLC22A7Q9Y694 548 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 F5H5K5 113 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 PVRP15151 417 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 CPN1P15169 458 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 NME2P22392 152 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 FPR3P25089 353 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 HLA-DMAP28067 261 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 SIRPAP78324 504 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 OR10Z1Q8NGY1 313 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 GLIPR2Q9H4G4 154 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 TRDV1A0A1B0GX56 115 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 H0YGG7 62 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 ADRB1P08588 477 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 PIPP12273 146 aaPredicted RBP13.17□□□□□ -0.3
LMX1B-202ENST00000373474 BMP1P13497 986 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 FOXK1P85037 733 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 C18orf63Q68DL7 685 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 GDF7Q7Z4P5 450 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 ZNF595Q8IYB9 648 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 CPNE4Q96A23 557 aaPredicted RBP13.17□□□□□ -0.3
LMX1B-202ENST00000373474 HDAC8Q9BY41 377 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 SLC6A20Q9NP91 592 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 PPP1R14DQ9NXH3 145 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 POU2F3Q9UKI9 436 aa13.17□□□□□ -0.3
LMX1B-202ENST00000373474 FUCA1P04066 466 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 GDNFP39905 211 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 TM4SF4P48230 202 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 DEFB133Q30KQ1 61 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 KIAA0895LQ68EN5 471 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 TECPR1Q7Z6L1 1165 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 CD163Q86VB7 1156 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 NLGN4XQ8N0W4 816 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 ADOQ96SZ5 270 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 SHC1P29353 583 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 FOXB2Q5VYV0 432 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 TMEM255BQ8WV15 326 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 FGF13Q92913 245 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 SIAEQ9HAT2 523 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 SPATA6Q9NWH7 488 aaPredicted RBP13.16□□□□□ -0.3
LMX1B-202ENST00000373474 EHFQ9NZC4 300 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 SPI1P17947 270 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms