RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 DNAJB11Q9UBS4 358 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 ANKRD30BLA7E2S9 258 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 PRSS42Q7Z5A4 293 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 LGI3Q8N145 548 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 OR6S1Q8NH40 331 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 SORT1Q99523 831 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 PDE7BQ9NP56 450 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 FRMPD2BQ6IN97 320 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 C11orf42Q8N5U0 333 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 C11orf49Q9H6J7 331 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 MED17Q9NVC6 651 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 GPX3P22352 226 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 GDI1P31150 447 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 VGLL4Q14135 290 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 OR8G2PQ6IF36 304 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 GNPNAT1Q96EK6 184 aaPredicted RBP14.24□□□□□ -0.13
COL5A1-201ENST00000371817 UBQLN3Q9H347 655 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 AKAP6Q13023 2319 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 LOC102723971A0A1B0GUV8 181 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 HOXC11O43248 304 aaPredicted RBP14.24□□□□□ -0.13
COL5A1-201ENST00000371817 ATP1B1P05026 303 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 APLNRP35414 380 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 UBE2G1P62253 170 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 LETMD1Q6P1Q0 360 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 TRAPPC2LH3BP13 241 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 UGDHO60701 494 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 PTHP01270 115 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 SRMP19623 302 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 IGFBP4P22692 258 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 OR2G6Q5TZ20 316 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 KIAA0319Q5VV43 1072 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 TEX50A0A1B0GTY4 177 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 ZNF728P0DKX0 622 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 PGGHGQ32M88 737 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 PRRT3Q5FWE3 981 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 VGLL2Q8N8G2 317 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 CLEC1AQ8NC01 280 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 MRGPRX2Q96LB1 330 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 F2RL3Q96RI0 385 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 STEAP1Q9UHE8 339 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 RTCAO00442 366 aaKnown RBP14.24□□□□□ -0.13
COL5A1-201ENST00000371817 EOMESO95936 686 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 AMTP48728 403 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 ELLP55199 621 aaPredicted RBP14.24□□□□□ -0.13
COL5A1-201ENST00000371817 ADPRMQ3LIE5 342 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 RPL7L1Q6DKI1 246 aaKnown RBP14.24□□□□□ -0.13
COL5A1-201ENST00000371817 METTL27Q8N6F8 245 aaPredicted RBP14.24□□□□□ -0.13
COL5A1-201ENST00000371817 MFSD9Q8NBP5 474 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 BCO2Q9BYV7 579 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 ZDHHC5Q9C0B5 715 aa14.24□□□□□ -0.13
COL5A1-201ENST00000371817 BMPR1BO00238 502 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 TYRP1P17643 537 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 FDXRP22570 491 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 ITGB8P26012 769 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 BMPR1AP36894 532 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 CCL23P55773 120 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 LOC100289279A0A1B0GTE1 492 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 A0A1W2PPQ1 181 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 GPR37L1O60883 481 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 SMIM6P0DI80 62 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 GSK3AP49840 483 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 ACOT6Q3I5F7 207 aaPredicted RBP14.23□□□□□ -0.13
COL5A1-201ENST00000371817 ISCA2Q86U28 154 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 NXF2Q9GZY0 626 aaKnown RBP14.23□□□□□ -0.13
COL5A1-201ENST00000371817 MN1Q10571 1320 aaPredicted RBP14.23□□□□□ -0.13
COL5A1-201ENST00000371817 KIF26BQ2KJY2 2108 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 ADH5P11766 374 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 FUT1P19526 365 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 IL2RGP31785 369 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 PMS2P11Q13670 270 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 KIAA0895LQ68EN5 471 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 GKN2Q86XP6 184 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 FUBP1Q96AE4 644 aaKnown RBP14.23□□□□□ -0.13
COL5A1-201ENST00000371817 SMIM7Q9BQ49 75 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 MACROD1Q9BQ69 325 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 NTMT1Q9BV86 223 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 DDAH2O95865 285 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 RPL24P83731 157 aaKnown RBP14.23□□□□□ -0.13
COL5A1-201ENST00000371817 TCTEX1D1Q8N7M0 179 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 OR5L2Q8NGL0 311 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 OR5L1Q8NGL2 311 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 THAP3Q8WTV1 239 aaPredicted RBP14.23□□□□□ -0.13
COL5A1-201ENST00000371817 TXLNGYQ9BZA5 131 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 ACOXLQ9NUZ1 547 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 RPLP1P05386 114 aaKnown RBP14.23□□□□□ -0.13
COL5A1-201ENST00000371817 PPP1CBP62140 327 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 MKXQ8IYA7 352 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 CASD1Q96PB1 797 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 NCR3LG1Q68D85 454 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 APIPQ96GX9 242 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 ZNF320A2RRD8 509 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 NAGAP17050 411 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 F2RP25116 425 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 DUSP28Q4G0W2 176 aa14.23□□□□□ -0.13
COL5A1-201ENST00000371817 ZNF845Q96IR2 970 aaPredicted RBP14.23□□□□□ -0.13
COL5A1-201ENST00000371817 NID2Q14112 1375 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 UNC13CQ8NB66 2214 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.22□□□□□ -0.13
COL5A1-201ENST00000371817 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.22□□□□□ -0.13
COL5A1-201ENST00000371817 OR2T7P0C7T2 308 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms