RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 ARL6IP5O75915 188 aa10.66□□□□□ -0.7
SMARCA1-201ENST00000371121 ANXA2P07355 339 aaKnown RBP10.66□□□□□ -0.7
SMARCA1-201ENST00000371121 OR4E1P0C645 316 aa10.66□□□□□ -0.7
SMARCA1-201ENST00000371121 SMIM6P0DI80 62 aa10.66□□□□□ -0.7
SMARCA1-201ENST00000371121 H3F3CQ6NXT2 135 aa10.66□□□□□ -0.7
SMARCA1-201ENST00000371121 SYS1Q8N2H4 156 aa10.66□□□□□ -0.7
SMARCA1-201ENST00000371121 ZNF433Q8N7K0 673 aaPredicted RBP10.66□□□□□ -0.7
SMARCA1-201ENST00000371121 NUP43Q8NFH3 380 aa10.66□□□□□ -0.7
SMARCA1-201ENST00000371121 OR1J2Q8NGS2 313 aa10.66□□□□□ -0.7
SMARCA1-201ENST00000371121 SFXN5Q8TD22 340 aa10.66□□□□□ -0.7
SMARCA1-201ENST00000371121 CD180Q99467 661 aa10.66□□□□□ -0.7
SMARCA1-201ENST00000371121 ZFP57Q9NU63 452 aa10.66□□□□□ -0.7
SMARCA1-201ENST00000371121 ASF1BQ9NVP2 202 aa10.66□□□□□ -0.7
SMARCA1-201ENST00000371121 MIOXQ9UGB7 285 aa10.66□□□□□ -0.7
SMARCA1-201ENST00000371121 KCNG2Q9UJ96 466 aa10.66□□□□□ -0.7
SMARCA1-201ENST00000371121 GNG8Q9UK08 70 aa10.66□□□□□ -0.7
SMARCA1-201ENST00000371121 LRFN2Q9ULH4 789 aa10.66□□□□□ -0.7
SMARCA1-201ENST00000371121 V9GY05 133 aa10.66□□□□□ -0.7
SMARCA1-201ENST00000371121 TMEM82A0PJX8 343 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 PEX12O00623 359 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 ABOP16442 354 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 RPS4Y1P22090 263 aaKnown RBP10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 CSNK1G2P78368 415 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 PRRT3Q5FWE3 981 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 C11orf87Q6NUJ2 197 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 RPL22L1Q6P5R6 122 aaKnown RBP10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 NDUFAF7Q7L592 441 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 SLC29A4Q7RTT9 530 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 GALNT16Q8N428 558 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 OR5M8Q8NGP6 311 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 BPIFA2Q96DR5 249 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 TNFRSF13CQ96RJ3 184 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 GHRLQ9UBU3 117 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 FAM96BQ9Y3D0 163 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 CHD9Q3L8U1 2897 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 A0A0A6YYC8 382 aaPredicted RBP10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 I3L1I5 382 aaPredicted RBP10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 XRCC3O43542 346 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 DNAJB6O75190 326 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 CTAG2O75638 210 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 MELTFP08582 738 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 SPI1P17947 270 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 CASRP41180 1078 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 PDZK1IP1Q13113 114 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 OR1Q1Q15612 314 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 AMZ1Q400G9 498 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 UNQ6126/PRO20091Q6UXV3 157 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 TMPPEQ6ZT21 453 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 OR5AP2Q8NGF4 316 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 THAP6Q8TBB0 222 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 OTUB2Q96DC9 234 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 S100A16Q96FQ6 103 aaKnown RBP10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 PLA2G2EQ9NZK7 142 aa10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 ZNF629Q9UEG4 869 aaPredicted RBP10.65□□□□□ -0.7
SMARCA1-201ENST00000371121 NPIPA5A0A0B4J1W7 369 aa10.65□□□□□ -0.71
SMARCA1-201ENST00000371121 WIPF3A6NGB9 483 aa10.65□□□□□ -0.71
SMARCA1-201ENST00000371121 NPIPA7E9PJI5 369 aa10.65□□□□□ -0.71
SMARCA1-201ENST00000371121 ALOX12BO75342 701 aa10.65□□□□□ -0.71
SMARCA1-201ENST00000371121 IGHV2-5P01817 119 aa10.65□□□□□ -0.71
SMARCA1-201ENST00000371121 RLN1P04808 185 aa10.65□□□□□ -0.71
SMARCA1-201ENST00000371121 NPIPA8P0DM63 369 aa10.65□□□□□ -0.71
SMARCA1-201ENST00000371121 SLC25A4P12235 298 aa10.65□□□□□ -0.71
SMARCA1-201ENST00000371121 ACTR1AP61163 376 aa10.65□□□□□ -0.71
SMARCA1-201ENST00000371121 OR7A5Q15622 319 aa10.65□□□□□ -0.71
SMARCA1-201ENST00000371121 SWI5Q1ZZU3 235 aa10.65□□□□□ -0.71
SMARCA1-201ENST00000371121 AVPI1Q5T686 147 aa10.65□□□□□ -0.71
SMARCA1-201ENST00000371121 BHLHE23Q8NDY6 225 aa10.65□□□□□ -0.71
SMARCA1-201ENST00000371121 SUSD6Q92537 303 aa10.65□□□□□ -0.71
SMARCA1-201ENST00000371121 RRNAD1Q96FB5 475 aaKnown RBP10.65□□□□□ -0.71
SMARCA1-201ENST00000371121 PHYHIPLQ96FC7 376 aa10.65□□□□□ -0.71
SMARCA1-201ENST00000371121 BBS4Q96RK4 519 aa10.65□□□□□ -0.71
SMARCA1-201ENST00000371121 EPHX3Q9H6B9 360 aa10.65□□□□□ -0.71
SMARCA1-201ENST00000371121 C14orf105Q9NVL8 296 aa10.65□□□□□ -0.71
SMARCA1-201ENST00000371121 FLRT3Q9NZU0 649 aa10.65□□□□□ -0.71
SMARCA1-201ENST00000371121 FRRS1LQ9P0K9 344 aa10.65□□□□□ -0.71
SMARCA1-201ENST00000371121 SERTAD3Q9UJW9 196 aa10.65□□□□□ -0.71
SMARCA1-201ENST00000371121 LDB3O75112 727 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 UPK3AO75631 287 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 ANXA11P50995 505 aaKnown RBP10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 KRT33BQ14525 404 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 ZIC1Q15915 447 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 TMEM25Q86YD3 366 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 NR4A3Q92570 626 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 LAT2Q9GZY6 243 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 OR51M1Q9H341 326 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 ADAM29Q9UKF5 820 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 ADAM18Q9Y3Q7 739 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 F8VVB4 439 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 F8VWA3 439 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 YKT6O15498 198 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 CD74P04233 296 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 OR8U8P0C7N1 319 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 CALCBP10092 127 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 EDNRAP25101 427 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 GRPRP30550 384 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 BCL6P41182 706 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 DUSP5Q16690 384 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 DPPA4Q7L190 304 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 OR13C8Q8NGS7 320 aa10.64□□□□□ -0.71
SMARCA1-201ENST00000371121 ZNF461Q8TAF7 563 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms